Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 AC121338.2-201ENST00000622535 1744 ntBASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 AC116351.2-201ENST00000606540 1585 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 RNF152P1-201ENST00000397754 604 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 AC117947.1-201ENST00000427448 529 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 TUBB8P6-201ENST00000436895 1288 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 AL138966.2-201ENST00000621997 464 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 AC116562.4-202ENST00000641738 218 ntBASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC163A0A0D9SF12 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 AC010653.2-201ENST00000623505 997 ntBASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 TFP1-202ENST00000475455 1573 ntBASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC163A0A0D9SF12 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 SLC25A1P2-201ENST00000430693 912 ntBASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 CCR12P-201ENST00000446203 998 ntBASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC163A0A0D9SF12 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 AC096733.2-201ENST00000609937 1394 ntBASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 AL031133.1-201ENST00000406807 723 ntBASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 SLC25A1P4-201ENST00000567977 778 ntBASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC163A0A0D9SF12 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC163A0A0D9SF12 ECEL1P1-201ENST00000373592 1742 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms