Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV34A0A0B4J273 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV34A0A0B4J273 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV34A0A0B4J273 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 NEFHP1-201ENST00000412845 2629 ntBASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 EEF1DP3-203ENST00000566025 782 ntBASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 AC233992.3-201ENST00000607491 485 ntBASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 MIR2861-201ENST00000636310 90 ntBASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV34A0A0B4J273 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV34A0A0B4J273 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 TMEM179-206ENST00000616017 1645 ntBASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV34A0A0B4J273 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 HTR7P1-202ENST00000624664 4411 ntBASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV34A0A0B4J273 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV34A0A0B4J273 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms