Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 RARRES2P4-201ENST00000514074 484 ntBASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV30A0A087WSZ9 AFG3L1P-217ENST00000557444 2447 ntBASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 AC069236.1-201ENST00000604339 616 ntBASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 KRT16P6-202ENST00000425692 1426 ntBASIC15.6■□□□□ 0.09
TRAV30A0A087WSZ9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 AC008694.1-202ENST00000636953 945 ntBASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV30A0A087WSZ9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV30A0A087WSZ9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV30A0A087WSZ9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms