Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZNF37CP-201ENST00000406795 241 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 RPSAP1-201ENST00000421328 880 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 GAPDHP55-201ENST00000423136 803 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 MTCO1P45-201ENST00000431457 267 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AL606490.7-201ENST00000433136 191 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 FO393419.1-201ENST00000443746 355 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 ST13P20-201ENST00000447996 1065 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 RPL7P42-201ENST00000481005 679 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC044836.1-201ENST00000519514 274 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 NTS-203ENST00000551529 801 ntTSL 3 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC011260.1-201ENST00000578420 472 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 MARK3P1-201ENST00000604796 643 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 FRG1KP-201ENST00000623592 341 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC127502.3-201ENST00000636170 1206 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AC024614.3-201ENST00000637860 256 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 AL133384.2-201ENST00000623755 2954 ntBASIC10.95□□□□□ -0.66
PHF8Q9UPP1 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
PHF8Q9UPP1 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC130456.1-201ENST00000565085 1363 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 RNA5SP448-201ENST00000363151 111 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 Y_RNA.465-201ENST00000384293 102 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 RNVU1-15-201ENST00000384476 165 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 OOSP1-201ENST00000398992 1270 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 VDAC2P3-201ENST00000430995 828 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 USP9YP8-201ENST00000441913 500 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 RPL7P32-201ENST00000457119 744 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 FAM92A1P2-202ENST00000504766 877 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 SNORA20.3-201ENST00000516880 132 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC007954.1-201ENST00000554198 494 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 UBE2FP2-201ENST00000566646 462 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AL391497.1-201ENST00000608671 547 ntBASIC10.94□□□□□ -0.66
PHF8Q9UPP1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms