Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 SNX18P13-201ENST00000412442 529 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 RPL17P17-201ENST00000419491 557 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC007064.3-201ENST00000422608 359 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 KIF4CP-201ENST00000422742 1279 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 RPL6P2-201ENST00000425480 783 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 FAR1P1-201ENST00000427163 934 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC073900.1-201ENST00000429766 776 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 PMS2P11-201ENST00000451831 574 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 SEPT7P6-201ENST00000469999 1143 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AP005202.1-201ENST00000489915 867 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 MRPL49P1-201ENST00000505951 535 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 RNU6-415P-201ENST00000516252 97 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 RN7SL42P-201ENST00000579786 294 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC010463.3-201ENST00000594077 500 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AL713998.2-201ENST00000604538 1198 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 RPS28P1-201ENST00000604589 187 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AP003789.1-201ENST00000617737 605 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 PART1_3.1-201ENST00000619680 131 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC073862.4-201ENST00000622982 854 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 RNF19BPY-201ENST00000458209 1550 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC006116.1-201ENST00000587908 2171 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AL662795.2-201ENST00000624252 3706 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.46□□□□□ -1.37
SNX18Q96RF0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SNX18Q96RF0 MARK2P4-201ENST00000503381 2380 ntBASIC6.46□□□□□ -1.37
SNX18Q96RF0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SNX18Q96RF0 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SNX18Q96RF0 AC079248.1-201ENST00000427568 1546 ntBASIC6.46□□□□□ -1.37
SNX18Q96RF0 AC068446.1-201ENST00000556425 1549 ntBASIC6.46□□□□□ -1.37
SNX18Q96RF0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SNX18Q96RF0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.46□□□□□ -1.37
SNX18Q96RF0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SNX18Q96RF0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 RN7SKP62-201ENST00000384539 329 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AL590762.1-201ENST00000391782 432 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 RN7SKP232-201ENST00000410170 290 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 CLIC4P3-201ENST00000422221 752 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AL354692.1-201ENST00000423044 315 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 MTCO1P57-201ENST00000432182 261 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 NPM1P48-201ENST00000436002 853 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 RPL5P27-201ENST00000437011 881 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AL158053.1-201ENST00000441503 453 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC013429.1-201ENST00000456604 422 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 RPS10P20-201ENST00000494130 463 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC008967.1-201ENST00000504843 163 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 RN7SKP242-201ENST00000515967 289 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC130364.2-201ENST00000528639 604 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC103855.4-201ENST00000533158 265 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNX18Q96RF0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.46□□□□□ -1.38
SNX18Q96RF0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.46□□□□□ -1.38
SNX18Q96RF0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms