Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 RN7SKP236-201ENST00000410635 284 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 RNA5SP265-201ENST00000411023 111 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 RBMY2FP-202ENST00000420346 1263 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 MED15P9-201ENST00000424716 533 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 MTND1P28-201ENST00000435623 950 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 RPS27AP2-201ENST00000457576 465 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 RPL35AP19-201ENST00000469425 329 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 RN7SL104P-201ENST00000498686 293 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC006499.5-201ENST00000505037 514 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 BNIP3P22-201ENST00000593399 556 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 MIR6761-201ENST00000617899 72 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC005383.1-201ENST00000622689 534 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 Z95114.3-201ENST00000624395 1921 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 MT-RNR2-201ENST00000387347 1559 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC087392.3-202ENST00000358446 1754 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 TNC-210ENST00000535648 7508 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 OR9G4-201ENST00000302957 984 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AMELY-202ENST00000383036 621 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 CXADRP1-201ENST00000398098 1095 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL139135.1-201ENST00000412675 209 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL031733.1-201ENST00000422817 455 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 FGF12-202ENST00000430714 603 ntTSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC007683.1-201ENST00000432746 591 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 COX6CP12-201ENST00000446748 202 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 RPL21P134-201ENST00000453468 483 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 RPL21P92-201ENST00000454107 476 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 PMCHL2-203ENST00000457791 237 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 RPL7P18-201ENST00000478965 734 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 ACTR3BP4-201ENST00000503033 1244 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC110792.2-201ENST00000510278 224 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC026782.1-201ENST00000512952 449 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL133457.1-201ENST00000564251 987 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC122134.1-201ENST00000565664 1104 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 FRG2HP-201ENST00000568807 832 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC090079.1-201ENST00000572092 1183 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 MIR3714-201ENST00000579507 65 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC015917.1-201ENST00000579654 510 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 OR51C1P-201ENST00000608504 942 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC9.19□□□□□ -0.94
LRCH3Q96II8 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LRCH3Q96II8 AL020991.1-201ENST00000612314 373 ntBASIC9.19□□□□□ -0.94
LRCH3Q96II8 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms