Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 NXT1P1-201ENST00000458481 316 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 RPL5P14-201ENST00000494197 878 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 RPL19P11-201ENST00000495944 589 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC9.22□□□□□ -0.93
PTCH1Q13635 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC9.22□□□□□ -0.93
PTCH1Q13635 AC036111.2-201ENST00000533247 901 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PTCH1Q13635 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.22□□□□□ -0.93
PTCH1Q13635 AC016144.1-201ENST00000548175 1087 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 AC073389.3-201ENST00000609434 935 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 AC026951.2-201ENST00000613847 241 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 FO681491.1-202ENST00000623392 737 ntBASIC9.22□□□□□ -0.93
PTCH1Q13635 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PTCH1Q13635 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC9.21□□□□□ -0.93
PTCH1Q13635 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC9.21□□□□□ -0.93
PTCH1Q13635 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.21□□□□□ -0.93
PTCH1Q13635 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 AC027279.1-201ENST00000568885 4284 ntBASIC9.21□□□□□ -0.93
PTCH1Q13635 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PTCH1Q13635 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
PTCH1Q13635 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC105342.1-201ENST00000378334 6848 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 SNORA51.9-201ENST00000384295 124 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AC094019.1-201ENST00000434678 472 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 RN7SL382P-201ENST00000482631 282 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC9.21□□□□□ -0.94
PTCH1Q13635 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC9.21□□□□□ -0.94
PTCH1Q13635 PVT1-214ENST00000522875 922 ntTSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AP005136.2-201ENST00000583253 1049 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AC008507.3-201ENST00000585753 472 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 TEX41-218ENST00000596540 882 ntTSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.21□□□□□ -0.94
PTCH1Q13635 SNORD91A-202ENST00000609620 191 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AC239803.2-201ENST00000610161 430 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AL512624.1-201ENST00000613638 469 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 IGKV2OR2-10-201ENST00000613976 311 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AP000577.1-201ENST00000624366 878 ntBASIC9.21□□□□□ -0.94
PTCH1Q13635 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC9.21□□□□□ -0.94
PTCH1Q13635 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC9.21□□□□□ -0.94
PTCH1Q13635 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PTCH1Q13635 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC9.21□□□□□ -0.94
PTCH1Q13635 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 AC245060.6-201ENST00000624350 8420 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC9.2□□□□□ -0.94
PTCH1Q13635 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PTCH1Q13635 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC9.2□□□□□ -0.94
PTCH1Q13635 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 NPL-212ENST00000614468 2376 ntTSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC9.2□□□□□ -0.94
PTCH1Q13635 RPL23AP85-201ENST00000421838 433 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.2□□□□□ -0.94
PTCH1Q13635 AC112492.2-201ENST00000432774 1030 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 PPIAP27-201ENST00000453800 265 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 COX6B1P2-201ENST00000489624 230 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 AP002453.1-201ENST00000492327 668 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 PABPC1P1-201ENST00000506347 591 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 PRMT5P1-201ENST00000514351 598 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 AC011352.2-201ENST00000514574 1016 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 AL591767.3-201ENST00000554632 525 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC9.2□□□□□ -0.94
PTCH1Q13635 AC092266.1-201ENST00000610958 165 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 LINC02495-203ENST00000636704 242 ntBASIC9.2□□□□□ -0.94
PTCH1Q13635 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PTCH1Q13635 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC9.2□□□□□ -0.94
PTCH1Q13635 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.2□□□□□ -0.94
PTCH1Q13635 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PTCH1Q13635 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PTCH1Q13635 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9.19□□□□□ -0.94
PTCH1Q13635 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.19□□□□□ -0.94
PTCH1Q13635 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PTCH1Q13635 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC9.19□□□□□ -0.94
PTCH1Q13635 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
PTCH1Q13635 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms