Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RPL39P62891 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RPL39P62891 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
RPL39P62891 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 SNORA70.9-201ENST00000384370 135 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC090114.1-201ENST00000393266 448 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AL451046.1-201ENST00000406097 534 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AL034372.1-201ENST00000407586 754 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AL023284.3-201ENST00000407767 334 ntBASIC4.64□□□□□ -1.67
RPL39P62891 IFNA12P-201ENST00000413147 571 ntBASIC4.64□□□□□ -1.67
RPL39P62891 TMA16P2-201ENST00000413187 601 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 NPM1P36-201ENST00000415681 835 ntBASIC4.64□□□□□ -1.67
RPL39P62891 PPIL1P1-201ENST00000423936 499 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AF274573.1-201ENST00000430535 494 ntBASIC4.64□□□□□ -1.67
RPL39P62891 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 MYL6P3-201ENST00000436904 432 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 AC009237.1-201ENST00000442127 744 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 OR7E102P-201ENST00000448855 1015 ntBASIC4.64□□□□□ -1.67
RPL39P62891 GAPDHP53-201ENST00000458397 924 ntBASIC4.64□□□□□ -1.67
RPL39P62891 RN7SL149P-201ENST00000465197 281 ntBASIC4.64□□□□□ -1.67
RPL39P62891 RN7SL216P-201ENST00000471607 298 ntBASIC4.64□□□□□ -1.67
RPL39P62891 MARK2P8-201ENST00000476069 952 ntBASIC4.64□□□□□ -1.67
RPL39P62891 TAAR3P-202ENST00000481759 1025 ntBASIC4.64□□□□□ -1.67
RPL39P62891 RPL34P29-201ENST00000491411 325 ntBASIC4.64□□□□□ -1.67
RPL39P62891 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.64□□□□□ -1.67
RPL39P62891 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 AC084337.1-201ENST00000524809 686 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 OR7E161P-201ENST00000533722 967 ntBASIC4.64□□□□□ -1.67
RPL39P62891 OR7E1P-201ENST00000533891 958 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 BOLA2P1-201ENST00000584794 232 ntBASIC4.64□□□□□ -1.67
RPL39P62891 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 AC011447.2-201ENST00000592921 283 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC007262.1-201ENST00000604099 321 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC087072.2-201ENST00000621060 682 ntBASIC4.64□□□□□ -1.67
RPL39P62891 AC087894.3-201ENST00000623682 349 ntBASIC4.64□□□□□ -1.67
RPL39P62891 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RPL39P62891 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 AC011369.2-201ENST00000624423 1567 ntBASIC4.64□□□□□ -1.67
RPL39P62891 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.64□□□□□ -1.67
RPL39P62891 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 AC022613.3-201ENST00000560740 1346 ntBASIC4.64□□□□□ -1.67
RPL39P62891 KYNUP2-201ENST00000582280 1329 ntBASIC4.64□□□□□ -1.67
RPL39P62891 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.64□□□□□ -1.67
RPL39P62891 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPL39P62891 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RPL39P62891 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 AC067942.1-201ENST00000488045 1493 ntBASIC4.63□□□□□ -1.67
RPL39P62891 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 MELK-211ENST00000545008 2236 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RPL39P62891 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RPL39P62891 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 RPS7P12-201ENST00000422385 582 ntBASIC4.63□□□□□ -1.67
RPL39P62891 GAPDHP57-201ENST00000424400 585 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC007365.2-201ENST00000428806 458 ntBASIC4.63□□□□□ -1.67
RPL39P62891 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms