Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 AC145207.5-201ENST00000582866 2682 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 MRRFP1-201ENST00000435941 1675 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 AC107398.3-201ENST00000562284 7000 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 SAMM50P1-201ENST00000455403 1399 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RNF144AP50876 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 Y_RNA.9-201ENST00000362354 101 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 OR1L1-202ENST00000373686 1083 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 Y_RNA.450-201ENST00000384198 113 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL031864.1-201ENST00000392075 423 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL603650.1-201ENST00000412680 240 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 ETF1P3-201ENST00000430422 1160 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF144AP50876 TMX2P1-201ENST00000436507 708 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC096632.2-201ENST00000438139 1239 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 AL158214.1-201ENST00000444423 404 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 PMS2P10-201ENST00000447708 612 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL157714.1-201ENST00000448964 625 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC013399.1-201ENST00000450311 418 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC026798.1-201ENST00000468490 482 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC091959.2-201ENST00000477363 321 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC008629.3-201ENST00000505786 586 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC114812.3-201ENST00000509542 730 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC009927.2-201ENST00000520812 481 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC013565.2-201ENST00000564874 310 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 RN7SL804P-201ENST00000582466 298 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 KC877982.1-201ENST00000602313 470 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 YWHAQP7-201ENST00000603536 658 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL049634.3-201ENST00000604968 457 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 AL022324.3-201ENST00000609330 747 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AL353726.1-201ENST00000614041 1000 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 GZMB-209ENST00000616551 559 ntTSL 2 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC239600.2-201ENST00000619615 1165 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC087645.3-201ENST00000624708 587 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 AC087565.3-203ENST00000641018 837 ntBASIC7.9□□□□□ -1.14
RNF144AP50876 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
RNF144AP50876 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
RNF144AP50876 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.9□□□□□ -1.15
RNF144AP50876 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
RNF144AP50876 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF144AP50876 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF144AP50876 TRAF6P1-201ENST00000429404 1558 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF144AP50876 TEX21P-201ENST00000447107 1476 ntBASIC7.89□□□□□ -1.15
RNF144AP50876 AL139805.2-201ENST00000455305 2433 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms