Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CDY18P-201ENST00000438294 1609 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AL592429.1-201ENST00000403909 1473 ntBASIC7.3□□□□□ -1.24
SSR1P43307 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 RPS3AP5-201ENST00000389400 821 ntBASIC7.3□□□□□ -1.24
SSR1P43307 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 RN7SKP236-201ENST00000410635 284 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AL157698.1-201ENST00000415190 1011 ntBASIC7.3□□□□□ -1.24
SSR1P43307 VDAC1P10-201ENST00000416715 891 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AC091982.1-202ENST00000473923 343 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 AC097460.2-201ENST00000511857 741 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 BCAS2P1-201ENST00000528022 632 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.3□□□□□ -1.24
SSR1P43307 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 MIR4420-201ENST00000583944 77 ntBASIC7.3□□□□□ -1.24
SSR1P43307 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 AC068234.2-201ENST00000619646 522 ntBASIC7.3□□□□□ -1.24
SSR1P43307 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SSR1P43307 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 AC012078.1-201ENST00000405035 1646 ntBASIC7.3□□□□□ -1.24
SSR1P43307 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SSR1P43307 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.3□□□□□ -1.24
SSR1P43307 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.29□□□□□ -1.24
SSR1P43307 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 AL662795.2-201ENST00000624252 3706 ntBASIC7.29□□□□□ -1.24
SSR1P43307 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 RN7SKP55-201ENST00000364888 307 ntBASIC7.29□□□□□ -1.24
SSR1P43307 U3.14-201ENST00000365363 227 ntBASIC7.29□□□□□ -1.24
SSR1P43307 PSMC1P2-201ENST00000423961 1204 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.29□□□□□ -1.24
SSR1P43307 FTLP17-201ENST00000432567 525 ntBASIC7.29□□□□□ -1.24
SSR1P43307 NDUFB4P1-201ENST00000462398 381 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AL928654.1-201ENST00000476081 354 ntBASIC7.29□□□□□ -1.24
SSR1P43307 RN7SL563P-201ENST00000481233 298 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC074386.1-206ENST00000487102 761 ntBASIC7.29□□□□□ -1.24
SSR1P43307 NPM1P21-201ENST00000513394 762 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC106800.2-201ENST00000514009 1103 ntBASIC7.29□□□□□ -1.24
SSR1P43307 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 FRG2IP-201ENST00000563581 781 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.29□□□□□ -1.24
SSR1P43307 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 MIR1273F-201ENST00000580581 99 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AF186192.2-204ENST00000581667 524 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC005070.2-201ENST00000604391 260 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC004839.1-201ENST00000610269 501 ntBASIC7.29□□□□□ -1.24
SSR1P43307 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 AL356585.10-201ENST00000641883 123 ntBASIC7.29□□□□□ -1.24
SSR1P43307 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SSR1P43307 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 OR5M2P-202ENST00000641241 4242 ntBASIC7.29□□□□□ -1.24
SSR1P43307 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.29□□□□□ -1.24
SSR1P43307 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SSR1P43307 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms