Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.14□□□□□ -1.27
APOEP02649 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
APOEP02649 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
APOEP02649 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.14□□□□□ -1.27
APOEP02649 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
APOEP02649 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
APOEP02649 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 AL451064.2-201ENST00000623514 1654 ntBASIC7.13□□□□□ -1.27
APOEP02649 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 ASNSP6-201ENST00000592770 1618 ntBASIC7.13□□□□□ -1.27
APOEP02649 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.13□□□□□ -1.27
APOEP02649 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
APOEP02649 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 AL079341.1-201ENST00000404701 1207 ntBASIC7.13□□□□□ -1.27
APOEP02649 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 RPL18AP14-201ENST00000417685 526 ntBASIC7.13□□□□□ -1.27
APOEP02649 FABP5P1-201ENST00000423401 411 ntBASIC7.13□□□□□ -1.27
APOEP02649 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.13□□□□□ -1.27
APOEP02649 CDK7P1-201ENST00000434574 693 ntBASIC7.13□□□□□ -1.27
APOEP02649 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 FABP5P2-201ENST00000439042 408 ntBASIC7.13□□□□□ -1.27
APOEP02649 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 RN7SL267P-201ENST00000485107 261 ntBASIC7.13□□□□□ -1.27
APOEP02649 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.13□□□□□ -1.27
APOEP02649 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.13□□□□□ -1.27
APOEP02649 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.13□□□□□ -1.27
APOEP02649 AP002004.1-206ENST00000532441 876 ntBASIC7.13□□□□□ -1.27
APOEP02649 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC7.13□□□□□ -1.27
APOEP02649 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
APOEP02649 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.13□□□□□ -1.27
APOEP02649 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.13□□□□□ -1.27
APOEP02649 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
APOEP02649 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
APOEP02649 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC7.13□□□□□ -1.27
APOEP02649 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
APOEP02649 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 MAPK10-344ENST00000641718 3746 ntBASIC7.12□□□□□ -1.27
APOEP02649 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 RNA5SP152-201ENST00000365184 110 ntBASIC7.12□□□□□ -1.27
APOEP02649 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 AC011742.2-201ENST00000443818 352 ntBASIC7.12□□□□□ -1.27
APOEP02649 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.12□□□□□ -1.27
APOEP02649 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.12□□□□□ -1.27
APOEP02649 RN7SKP98-201ENST00000517070 156 ntBASIC7.12□□□□□ -1.27
APOEP02649 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7.12□□□□□ -1.27
APOEP02649 OR9L1P-201ENST00000529493 933 ntBASIC7.12□□□□□ -1.27
APOEP02649 AP006587.5-201ENST00000532033 739 ntBASIC7.12□□□□□ -1.27
APOEP02649 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 GTF2IP6-201ENST00000583143 541 ntBASIC7.12□□□□□ -1.27
APOEP02649 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.12□□□□□ -1.27
APOEP02649 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.12□□□□□ -1.27
APOEP02649 DIMT1P1-201ENST00000603970 763 ntBASIC7.12□□□□□ -1.27
APOEP02649 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 AC005858.3-201ENST00000624756 589 ntBASIC7.12□□□□□ -1.27
APOEP02649 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
APOEP02649 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
APOEP02649 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.12□□□□□ -1.27
APOEP02649 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
APOEP02649 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
APOEP02649 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.11□□□□□ -1.27
APOEP02649 AC007114.2-201ENST00000576014 4281 ntBASIC7.11□□□□□ -1.27
APOEP02649 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.11□□□□□ -1.27
APOEP02649 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
APOEP02649 AC009135.2-201ENST00000624136 1768 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms