Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RN7SL366P-201ENST00000577957 292 ntBASIC6.15□□□□□ -1.42
ZIC3O60481 AC245128.3-201ENST00000594721 748 ntBASIC6.15□□□□□ -1.42
ZIC3O60481 AC025287.2-201ENST00000621911 668 ntBASIC6.15□□□□□ -1.42
ZIC3O60481 AC127071.2-201ENST00000623293 527 ntBASIC6.15□□□□□ -1.42
ZIC3O60481 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
ZIC3O60481 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
ZIC3O60481 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
ZIC3O60481 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.15□□□□□ -1.43
ZIC3O60481 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.15□□□□□ -1.43
ZIC3O60481 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.15□□□□□ -1.43
ZIC3O60481 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.15□□□□□ -1.43
ZIC3O60481 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZIC3O60481 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.15□□□□□ -1.43
ZIC3O60481 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 BX322650.1-201ENST00000332359 2143 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AP005139.1-201ENST00000580702 1647 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC096992.2-201ENST00000609553 1684 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 OR5T3-201ENST00000303059 1023 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
ZIC3O60481 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ZIC3O60481 UBBP1-201ENST00000392399 473 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 RANP7-201ENST00000418085 644 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC008753.1-201ENST00000423096 284 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 GAPDHP20-201ENST00000444107 1007 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 PPIAP32-201ENST00000449940 472 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.14□□□□□ -1.43
ZIC3O60481 RPL31P11-202ENST00000454082 372 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 RN7SKP198-201ENST00000459286 306 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 RPS3AP49-201ENST00000472161 790 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 RN7SL70P-201ENST00000478322 302 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC009567.2-201ENST00000502989 349 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 MINOS1P4-201ENST00000515470 318 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC007068.2-201ENST00000543168 395 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ZIC3O60481 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 HMGN1P26-201ENST00000558737 303 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC234775.3-201ENST00000564612 656 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC027796.1-201ENST00000575593 512 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 PPIAP14-201ENST00000577627 496 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AP000919.1-201ENST00000582850 985 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC009303.3-201ENST00000591103 736 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC007620.3-201ENST00000608131 497 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AL138693.1-201ENST00000622219 129 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 AC130448.2-201ENST00000624082 374 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 SSXP3-201ENST00000442971 1300 ntBASIC6.14□□□□□ -1.43
ZIC3O60481 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.14□□□□□ -1.43
ZIC3O60481 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms