Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 AL022323.4-201ENST00000623980 13120 ntBASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RHBDD3Q9Y3P4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 AL391261.1-201ENST00000555712 1479 ntBASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RHBDD3Q9Y3P4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SKP47-201ENST00000365347 328 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 MIR541-201ENST00000401360 84 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL359715.1-201ENST00000404330 555 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 CLCN3P1-201ENST00000423965 1017 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL353803.3-201ENST00000444641 335 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 RPSAP48-201ENST00000466509 889 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC083806.1-201ENST00000468934 316 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 RPL5P15-201ENST00000475870 897 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC021220.1-201ENST00000507445 630 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ENPP7P3-201ENST00000509123 241 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 SCARNA18.2-201ENST00000516882 84 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AP004607.6-201ENST00000525033 1202 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AP006587.5-201ENST00000532033 739 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC244034.2-201ENST00000562504 509 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL697P-201ENST00000582484 299 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 SIGLEC31P-201ENST00000594237 551 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 MIR6731-201ENST00000614863 72 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AP005212.3-201ENST00000619964 528 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AC119674.1-204ENST00000641348 1343 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 AL359694.2-201ENST00000567753 1615 ntBASIC5.96□□□□□ -1.46
RHBDD3Q9Y3P4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 MAPK10-287ENST00000641217 3037 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms