Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AP003115.1-201ENST00000569849 463 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 RN7SL697P-201ENST00000582484 299 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 MIR3159-201ENST00000584572 74 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 SIGLEC31P-201ENST00000594237 551 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AL669830.1-201ENST00000621457 656 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AP000577.1-201ENST00000624366 878 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 MAPK10-287ENST00000641217 3037 ntBASIC6.59□□□□□ -1.35
CCDC28BQ9BUN5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC28BQ9BUN5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CCDC28BQ9BUN5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC28BQ9BUN5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC28BQ9BUN5 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 SNORA35-201ENST00000386104 128 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 EIF4A1P13-201ENST00000415667 230 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AL139415.1-201ENST00000424862 352 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AL355355.1-201ENST00000442900 793 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 RN7SL379P-201ENST00000479912 293 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC079594.1-201ENST00000489757 331 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC106774.2-201ENST00000510266 406 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC020914.7-201ENST00000594477 545 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AL035410.2-201ENST00000604963 864 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AC004908.1-201ENST00000606572 541 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 AL137246.2-201ENST00000613439 662 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 RN7SL126P-201ENST00000616400 299 ntBASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC28BQ9BUN5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC009831.5-201ENST00000624000 3189 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 WDR95P-201ENST00000425638 1542 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RN7SKP118-201ENST00000364331 330 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 SNORA51.7-201ENST00000384171 134 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 IFNA12P-201ENST00000413147 571 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RPSAP59-201ENST00000421048 890 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RPLP0P1-201ENST00000457002 361 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 MYL6P4-201ENST00000477911 453 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC092824.1-201ENST00000483524 576 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RN7SL608P-201ENST00000492377 279 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 RN7SL187P-201ENST00000495587 303 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 EIF4A3P1-201ENST00000578499 647 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 CTSLP2-201ENST00000580501 394 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AL078623.1-201ENST00000602702 907 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AC009120.7-201ENST00000623452 780 ntBASIC6.57□□□□□ -1.36
CCDC28BQ9BUN5 AL162377.2-201ENST00000624532 337 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms