Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 AC116312.1-201ENST00000606841 314 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AP001437.1-201ENST00000608783 456 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 AL160413.1-201ENST00000622780 310 ntBASIC9.22□□□□□ -0.93
LRCH3Q96II8 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LRCH3Q96II8 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
LRCH3Q96II8 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LRCH3Q96II8 MTCO1P9-201ENST00000505577 1534 ntBASIC9.21□□□□□ -0.93
LRCH3Q96II8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LRCH3Q96II8 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LRCH3Q96II8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.21□□□□□ -0.93
LRCH3Q96II8 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LRCH3Q96II8 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 RNU6-253P-201ENST00000384730 105 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 OLA1P1-201ENST00000396387 1189 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 SNORA11B-201ENST00000408175 129 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 SNX18P13-201ENST00000412442 529 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 CRIP1P3-201ENST00000416794 220 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 EIF4A1P5-201ENST00000428062 1095 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 ZYG11AP1-201ENST00000430329 837 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL035458.1-201ENST00000433096 585 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL606490.7-201ENST00000433136 191 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 MTND4LP10-201ENST00000435146 291 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC239800.1-201ENST00000442049 719 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 RPS27P5-201ENST00000444247 244 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC105252.1-201ENST00000503089 286 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 HSPE1P10-201ENST00000508631 558 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 MRPS5P3-201ENST00000515577 166 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AP000619.1-201ENST00000540293 1000 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL121821.2-201ENST00000556081 394 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL359715.3-201ENST00000569267 2123 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC007952.7-201ENST00000583141 757 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 PLEKHA3P1-201ENST00000598554 894 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AP001429.1-201ENST00000602568 530 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC073137.1-201ENST00000605636 634 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC119619.1-201ENST00000619728 112 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC005899.6-201ENST00000620729 297 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 TET1P1-201ENST00000426627 2301 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.21□□□□□ -0.94
LRCH3Q96II8 AC016722.3-201ENST00000568862 2463 ntBASIC9.21□□□□□ -0.94
LRCH3Q96II8 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 AL031118.1-201ENST00000607727 2955 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LRCH3Q96II8 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LRCH3Q96II8 RNU6-254P-201ENST00000363377 107 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 RNY4P14-201ENST00000363656 96 ntBASIC9.2□□□□□ -0.94
LRCH3Q96II8 Y_RNA.216-201ENST00000364205 93 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms