Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 OR7E161P-201ENST00000533722 967 ntBASIC7.5□□□□□ -1.21
TPM4P67936 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.5□□□□□ -1.21
TPM4P67936 AL049869.4-201ENST00000555669 178 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.5□□□□□ -1.21
TPM4P67936 RN7SL270P-201ENST00000579643 281 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC7.5□□□□□ -1.21
TPM4P67936 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.5□□□□□ -1.21
TPM4P67936 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC004241.2-201ENST00000614562 444 ntBASIC7.5□□□□□ -1.21
TPM4P67936 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC021422.1-201ENST00000621212 473 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AP000577.1-201ENST00000624366 878 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.5□□□□□ -1.21
TPM4P67936 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 ATP5BP1-201ENST00000411980 1574 ntBASIC7.5□□□□□ -1.21
TPM4P67936 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 MAPK10-261ENST00000641050 3109 ntBASIC7.49□□□□□ -1.21
TPM4P67936 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 RNU1-46P-201ENST00000384425 164 ntBASIC7.49□□□□□ -1.21
TPM4P67936 OR2W4P-201ENST00000406496 926 ntBASIC7.49□□□□□ -1.21
TPM4P67936 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.49□□□□□ -1.21
TPM4P67936 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.49□□□□□ -1.21
TPM4P67936 H3F3BP1-201ENST00000440551 403 ntBASIC7.49□□□□□ -1.21
TPM4P67936 NMNAT1P3-201ENST00000457517 888 ntBASIC7.49□□□□□ -1.21
TPM4P67936 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.49□□□□□ -1.21
TPM4P67936 RPL7P17-201ENST00000470927 724 ntBASIC7.49□□□□□ -1.21
TPM4P67936 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.49□□□□□ -1.21
TPM4P67936 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.49□□□□□ -1.21
TPM4P67936 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 AP003084.1-201ENST00000524828 742 ntBASIC7.49□□□□□ -1.21
TPM4P67936 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.49□□□□□ -1.21
TPM4P67936 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 AC113361.1-201ENST00000606683 543 ntBASIC7.49□□□□□ -1.21
TPM4P67936 AC243830.3-201ENST00000616810 376 ntBASIC7.49□□□□□ -1.21
TPM4P67936 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 PART1_3.1-201ENST00000619680 131 ntBASIC7.49□□□□□ -1.21
TPM4P67936 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.49□□□□□ -1.21
TPM4P67936 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.49□□□□□ -1.21
TPM4P67936 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.49□□□□□ -1.21
TPM4P67936 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 AC022613.3-201ENST00000560740 1346 ntBASIC7.49□□□□□ -1.21
TPM4P67936 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TPM4P67936 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.48□□□□□ -1.21
TPM4P67936 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TPM4P67936 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 RNA5SP350-201ENST00000363298 111 ntBASIC7.48□□□□□ -1.21
TPM4P67936 RNA5SP442-201ENST00000365050 107 ntBASIC7.48□□□□□ -1.21
TPM4P67936 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
TPM4P67936 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 SNORA70.9-201ENST00000384370 135 ntBASIC7.48□□□□□ -1.21
TPM4P67936 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TPM4P67936 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.48□□□□□ -1.21
TPM4P67936 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.48□□□□□ -1.21
TPM4P67936 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.48□□□□□ -1.21
TPM4P67936 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.48□□□□□ -1.21
TPM4P67936 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
TPM4P67936 GOT2P2-201ENST00000450663 1251 ntBASIC7.48□□□□□ -1.21
TPM4P67936 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 RN7SL228P-201ENST00000470060 303 ntBASIC7.48□□□□□ -1.21
TPM4P67936 TAAR3P-202ENST00000481759 1025 ntBASIC7.48□□□□□ -1.21
TPM4P67936 RPL23AP80-201ENST00000495605 424 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms