Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.53□□□□□ -1.04
COL15A1P39059 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.53□□□□□ -1.04
COL15A1P39059 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.53□□□□□ -1.04
COL15A1P39059 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
COL15A1P39059 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
COL15A1P39059 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.52□□□□□ -1.04
COL15A1P39059 AC020978.8-201ENST00000571975 3022 ntBASIC8.52□□□□□ -1.04
COL15A1P39059 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 RPL11P4-201ENST00000332269 436 ntBASIC8.52□□□□□ -1.05
COL15A1P39059 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 RANP6-201ENST00000413691 644 ntBASIC8.52□□□□□ -1.05
COL15A1P39059 CRYGGP-201ENST00000443337 145 ntBASIC8.52□□□□□ -1.05
COL15A1P39059 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC8.52□□□□□ -1.05
COL15A1P39059 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.52□□□□□ -1.05
COL15A1P39059 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.52□□□□□ -1.05
COL15A1P39059 AC002310.3-201ENST00000569728 723 ntBASIC8.52□□□□□ -1.05
COL15A1P39059 SYPL1P2-201ENST00000582878 727 ntBASIC8.52□□□□□ -1.05
COL15A1P39059 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
COL15A1P39059 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.52□□□□□ -1.05
COL15A1P39059 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.52□□□□□ -1.05
COL15A1P39059 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.52□□□□□ -1.05
COL15A1P39059 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
COL15A1P39059 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
COL15A1P39059 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
COL15A1P39059 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.52□□□□□ -1.05
COL15A1P39059 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 MRPS6P2-201ENST00000381143 370 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.51□□□□□ -1.05
COL15A1P39059 BTG3P1-201ENST00000435859 716 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 OR13C1P-201ENST00000457612 963 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 AC021074.2-201ENST00000468434 172 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.51□□□□□ -1.05
COL15A1P39059 AC018645.1-201ENST00000505003 109 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
COL15A1P39059 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 AC125612.1-201ENST00000547580 377 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.51□□□□□ -1.05
COL15A1P39059 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.51□□□□□ -1.05
COL15A1P39059 MIR4502-201ENST00000580432 81 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.51□□□□□ -1.05
COL15A1P39059 AC124045.1-201ENST00000606008 1953 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 AC131009.3-201ENST00000621809 287 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 AC022400.9-201ENST00000623633 273 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 AC120057.5-201ENST00000623840 154 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 AL034417.4-202ENST00000642135 2236 ntBASIC8.51□□□□□ -1.05
COL15A1P39059 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
COL15A1P39059 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.51□□□□□ -1.05
COL15A1P39059 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.51□□□□□ -1.05
COL15A1P39059 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
COL15A1P39059 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.5□□□□□ -1.05
COL15A1P39059 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
COL15A1P39059 SNORA38B-201ENST00000363524 131 ntBASIC8.5□□□□□ -1.05
COL15A1P39059 AC003045.1-201ENST00000398779 713 ntBASIC8.5□□□□□ -1.05
COL15A1P39059 RPSAP65-201ENST00000429660 595 ntBASIC8.5□□□□□ -1.05
COL15A1P39059 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.5□□□□□ -1.05
COL15A1P39059 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms