Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.41□□□□□ -1.38
COL5A1P20908 RPL23AP85-201ENST00000421838 433 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 BX510359.3-201ENST00000422168 306 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 CXCR2P1-202ENST00000443392 1074 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
COL5A1P20908 GM2AP2-201ENST00000491764 562 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC021220.1-201ENST00000507445 630 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC106872.4-201ENST00000510050 523 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A1P20908 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 NANOGNBP2-201ENST00000544753 553 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A1P20908 AL591767.3-201ENST00000554632 525 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 MIR4502-201ENST00000580432 81 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC124916.2-201ENST00000604416 224 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AL136097.3-201ENST00000611097 505 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AL096712.1-201ENST00000614561 159 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 U1.41-201ENST00000617626 165 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC131009.3-201ENST00000621809 287 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 SAMMSON-214ENST00000641395 1264 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
COL5A1P20908 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.41□□□□□ -1.38
COL5A1P20908 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 AC011379.1-201ENST00000508713 3025 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC022613.3-201ENST00000560740 1346 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL5A1P20908 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC091390.2-201ENST00000432573 374 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 PNKDP1-201ENST00000435914 430 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 RBMY3AP-201ENST00000449381 1145 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 SULT1D1P-201ENST00000458020 882 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 RPL7P51-201ENST00000490532 749 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 RN7SL284P-201ENST00000498823 275 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 IGKV3D-25-201ENST00000519599 235 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.41□□□□□ -1.38
COL5A1P20908 AC023968.1-201ENST00000560719 475 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC067773.1-201ENST00000603284 1094 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC108865.2-201ENST00000606881 432 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 AC026124.2-201ENST00000621847 656 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 TSHZ2-205ENST00000626626 670 ntBASIC6.41□□□□□ -1.38
COL5A1P20908 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.41□□□□□ -1.38
COL5A1P20908 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL5A1P20908 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.41□□□□□ -1.38
COL5A1P20908 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.4□□□□□ -1.38
COL5A1P20908 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 AC027279.1-201ENST00000568885 4284 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 Z97832.2-201ENST00000605896 4261 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
COL5A1P20908 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL5A1P20908 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL5A1P20908 RPL5P20-201ENST00000403848 896 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 RN7SKP271-201ENST00000410528 320 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 RPL12P16-201ENST00000431098 498 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.4□□□□□ -1.38
COL5A1P20908 RN7SL174P-201ENST00000475578 289 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 ZNF519P4-201ENST00000514008 125 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.4□□□□□ -1.38
COL5A1P20908 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.4□□□□□ -1.38
COL5A1P20908 AP003115.1-201ENST00000569849 463 ntBASIC6.4□□□□□ -1.38
COL5A1P20908 RN7SL366P-201ENST00000577957 292 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms