Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NEPNP-201ENST00000404786 1371 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 MIR375-201ENST00000362103 64 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SNORA21-201ENST00000362423 132 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 RNA5SP333-201ENST00000363466 118 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 RNA5SP334-201ENST00000364825 118 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 CNOT7P2-201ENST00000441051 832 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SPRYD7P1-201ENST00000443861 570 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SNORA70.20-201ENST00000516848 126 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 HMGN2P6-201ENST00000551091 273 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 RN7SL708P-201ENST00000580952 299 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 RN7SKP121-201ENST00000410842 305 ntBASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 BMS1P17-202ENST00000416720 316 ntBASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
RIMBP3Q9UFD9 RP1-206ENST00000636932 3649 ntTSL 5 BASIC10.27□□□□□ -0.76
RIMBP3Q9UFD9 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC10.27□□□□□ -0.76
RIMBP3Q9UFD9 AC092725.2-201ENST00000567658 1389 ntBASIC10.27□□□□□ -0.76
RIMBP3Q9UFD9 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.27□□□□□ -0.76
RIMBP3Q9UFD9 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 RNA5SP46-201ENST00000362370 120 ntBASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 RPL31-202ENST00000409000 641 ntTSL 2 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AC009220.1-201ENST00000451614 275 ntBASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AL591167.1-201ENST00000607321 456 ntBASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AC090510.2-201ENST00000617465 629 ntBASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
RIMBP3Q9UFD9 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 MIR1286-201ENST00000408112 78 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AL139148.1-201ENST00000427122 680 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AC074087.1-201ENST00000512059 724 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 FO393422.1-201ENST00000603908 708 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 PKD1L2-205ENST00000527937 4165 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AL359694.2-201ENST00000567753 1615 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 EXOC7P1-201ENST00000509881 2059 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 CARF-201ENST00000320443 5209 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms