Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 MAPK10-323ENST00000641493 3207 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC079248.1-201ENST00000427568 1546 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 ASNSP6-201ENST00000592770 1618 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SPATA31C1-201ENST00000420021 3895 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AL663061.1-201ENST00000416625 580 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 CDC42P6-201ENST00000421246 576 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC091390.2-201ENST00000432573 374 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC099340.1-201ENST00000475247 599 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC091849.1-201ENST00000509920 121 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 MINOS1P4-201ENST00000515470 318 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC027796.1-201ENST00000575593 512 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RN7SL199P-201ENST00000578752 281 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RN7SL656P-201ENST00000579044 281 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RN7SL404P-201ENST00000582421 281 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC020658.2-201ENST00000559030 4020 ntBASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.25□□□□□ -1.41
C9orf40Q8IXQ3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RPL24P4-201ENST00000326586 421 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms