Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL445649.1-201ENST00000615941 691 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 VN2R1P-201ENST00000449668 1743 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 OR52K3P-202ENST00000641797 1729 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 PSMC1P6-201ENST00000477233 1319 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 RN7SKP103-201ENST00000363848 320 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 SNORA74A-201ENST00000364089 198 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 MRPS6P2-201ENST00000381143 370 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL359092.1-201ENST00000417156 265 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL606490.8-201ENST00000441624 319 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC016908.1-201ENST00000442571 1219 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 PFN1P6-201ENST00000476786 399 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 RNA5SP362-201ENST00000516048 118 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL355333.1-201ENST00000605632 279 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AL136146.1-201ENST00000529830 1667 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC131649.2-201ENST00000624925 4439 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC105046.1-201ENST00000566457 4997 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 RNA5SP514-201ENST00000363717 111 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 RPL26P30-201ENST00000453533 435 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC026356.1-201ENST00000622688 1357 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC079753.1-201ENST00000623243 3868 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 OR3A2-201ENST00000408891 1076 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 FTH1P5-201ENST00000425761 545 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC008627.1-201ENST00000517511 1704 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AL445383.1-201ENST00000554689 874 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC068802.1-201ENST00000603420 732 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 U1.41-201ENST00000617626 165 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC129778.1-202ENST00000623812 261 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AL591379.1-207ENST00000635982 261 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 AC005614.1-201ENST00000598952 3653 ntBASIC6.57□□□□□ -1.36
RIF1Q5UIP0 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RIF1Q5UIP0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms