Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC016724.1-201ENST00000453215 421 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 CCNJP2-201ENST00000457810 1163 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC093816.1-201ENST00000515076 913 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.38□□□□□ -1.23
UBE3AQ05086 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC009729.1-201ENST00000548873 1133 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 ACTG1P15-201ENST00000570019 1063 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.38□□□□□ -1.23
UBE3AQ05086 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AP005329.3-201ENST00000609924 686 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC011592.1-201ENST00000624647 3634 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
UBE3AQ05086 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC087392.3-202ENST00000358446 1754 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
UBE3AQ05086 AC129502.1-201ENST00000623261 1654 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UBE3AQ05086 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
UBE3AQ05086 FLJ42393-201ENST00000623801 2270 ntBASIC7.38□□□□□ -1.23
UBE3AQ05086 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
UBE3AQ05086 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 UBBP1-201ENST00000392399 473 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 MIR1275-201ENST00000408770 80 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 RN7SKP188-201ENST00000410789 317 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 AL139158.1-201ENST00000424719 340 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AL157385.1-201ENST00000446973 268 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 OR7E22P-201ENST00000478335 1035 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 RPS27P20-201ENST00000492051 246 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.37□□□□□ -1.23
UBE3AQ05086 TRAV11-201ENST00000539512 339 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 TDGP1-201ENST00000543961 1229 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.37□□□□□ -1.23
UBE3AQ05086 AC005519.1-201ENST00000554490 601 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 AC037479.1-201ENST00000558361 625 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
UBE3AQ05086 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.37□□□□□ -1.23
UBE3AQ05086 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
UBE3AQ05086 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.37□□□□□ -1.23
UBE3AQ05086 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
UBE3AQ05086 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
UBE3AQ05086 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
UBE3AQ05086 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
UBE3AQ05086 NF1P8-201ENST00000415351 1461 ntBASIC7.36□□□□□ -1.23
UBE3AQ05086 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.36□□□□□ -1.23
UBE3AQ05086 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.36□□□□□ -1.23
UBE3AQ05086 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.36□□□□□ -1.23
UBE3AQ05086 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.36□□□□□ -1.23
UBE3AQ05086 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
UBE3AQ05086 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
UBE3AQ05086 SPATA31C1-201ENST00000420021 3895 ntBASIC7.36□□□□□ -1.23
UBE3AQ05086 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms