Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
H3F3AP84243 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 KYNUP2-201ENST00000582280 1329 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
H3F3AP84243 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 RPL24P4-201ENST00000326586 421 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 RNA5SP152-201ENST00000365184 110 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
H3F3AP84243 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.1□□□□□ -1.43
H3F3AP84243 RPL18AP14-201ENST00000417685 526 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AC009303.1-201ENST00000426307 352 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AC092646.1-201ENST00000427142 901 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 RPS10P21-201ENST00000430654 475 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.1□□□□□ -1.43
H3F3AP84243 CRYGGP-201ENST00000443337 145 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.1□□□□□ -1.43
H3F3AP84243 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.1□□□□□ -1.43
H3F3AP84243 TREML3P-201ENST00000457327 501 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.1□□□□□ -1.43
H3F3AP84243 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.1□□□□□ -1.43
H3F3AP84243 AC106800.2-201ENST00000514009 1103 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 MRPL57P3-201ENST00000619218 176 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 AP005139.1-201ENST00000580702 1647 ntBASIC6.1□□□□□ -1.43
H3F3AP84243 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 Z97989.1-201ENST00000531702 2421 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 WBP11P1-201ENST00000562560 1931 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 HSPD1P1-201ENST00000503199 1726 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 RN7SKP130-201ENST00000364924 301 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.09□□□□□ -1.43
H3F3AP84243 AC091492.1-201ENST00000419844 272 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
H3F3AP84243 RPL23AP28-201ENST00000448062 470 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 RN7SL654P-201ENST00000479178 292 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 SNX18P23-201ENST00000510867 677 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 OR10J9P-201ENST00000511932 987 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 AC026774.2-201ENST00000513990 1098 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 AC087752.2-201ENST00000521219 281 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 CTSLP2-201ENST00000580501 394 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.09□□□□□ -1.43
H3F3AP84243 MIR3159-201ENST00000584572 74 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 OR7E19P-202ENST00000589942 844 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 AL590032.1-201ENST00000604920 252 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 AL137000.1-201ENST00000610528 1244 ntBASIC6.09□□□□□ -1.43
H3F3AP84243 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.09□□□□□ -1.43
H3F3AP84243 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.09□□□□□ -1.43
H3F3AP84243 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms