Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 SNX18P10-201ENST00000625014 519 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.79□□□□□ -1.16
CCNA1P78396 MIR1910-201ENST00000636955 80 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 AL096816.1-201ENST00000623300 2920 ntBASIC7.79□□□□□ -1.16
CCNA1P78396 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.79□□□□□ -1.16
CCNA1P78396 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.79□□□□□ -1.16
CCNA1P78396 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCNA1P78396 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 AC123769.2-201ENST00000624332 5984 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.78□□□□□ -1.16
CCNA1P78396 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 RN7SKP62-201ENST00000384539 329 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 RNA5SP115-201ENST00000411160 107 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 GSTA6P-201ENST00000424144 582 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.78□□□□□ -1.16
CCNA1P78396 AC079807.1-201ENST00000429993 481 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 ARMC4P1-201ENST00000438905 707 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.78□□□□□ -1.16
CCNA1P78396 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.78□□□□□ -1.16
CCNA1P78396 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 AC083806.1-201ENST00000468934 316 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 AC021006.1-201ENST00000489849 553 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 RN7SL362P-201ENST00000494228 267 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 RN7SL187P-201ENST00000495587 303 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 SNORA74.1-201ENST00000516320 180 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.78□□□□□ -1.16
CCNA1P78396 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.78□□□□□ -1.16
CCNA1P78396 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CCNA1P78396 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CCNA1P78396 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.78□□□□□ -1.16
CCNA1P78396 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCNA1P78396 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CCNA1P78396 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CCNA1P78396 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.77□□□□□ -1.17
CCNA1P78396 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 MAPK10-379ENST00000642013 1385 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 STAG3L4-201ENST00000352103 530 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CCNA1P78396 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CCNA1P78396 PRELID1P2-201ENST00000407805 396 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.77□□□□□ -1.17
CCNA1P78396 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 RANP6-201ENST00000413691 644 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 MRPS21P5-201ENST00000417885 231 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.77□□□□□ -1.17
CCNA1P78396 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.77□□□□□ -1.17
CCNA1P78396 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.77□□□□□ -1.17
CCNA1P78396 AL034399.1-201ENST00000451535 380 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC096743.1-201ENST00000485172 319 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.77□□□□□ -1.17
CCNA1P78396 AC018797.1-201ENST00000510791 255 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.77□□□□□ -1.17
CCNA1P78396 EEF1B2P2-201ENST00000519625 676 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC005363.1-201ENST00000530779 351 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC084121.1-201ENST00000533882 835 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.77□□□□□ -1.17
CCNA1P78396 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms