Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 AL049869.1-201ENST00000556933 1402 ntBASIC7.35□□□□□ -1.23
SSR1P43307 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SSR1P43307 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.34□□□□□ -1.23
SSR1P43307 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SSR1P43307 RPL12P13-201ENST00000310055 497 ntBASIC7.34□□□□□ -1.23
SSR1P43307 RNU4-81P-201ENST00000363561 144 ntBASIC7.34□□□□□ -1.23
SSR1P43307 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 PPIAP26-201ENST00000377951 522 ntBASIC7.34□□□□□ -1.23
SSR1P43307 RPSAP44-201ENST00000406712 884 ntBASIC7.34□□□□□ -1.23
SSR1P43307 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 RBMY2JP-201ENST00000425544 1059 ntBASIC7.34□□□□□ -1.23
SSR1P43307 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.34□□□□□ -1.23
SSR1P43307 NIP7P1-201ENST00000433227 512 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.34□□□□□ -1.23
SSR1P43307 AC011742.2-201ENST00000443818 352 ntBASIC7.34□□□□□ -1.23
SSR1P43307 RN7SL392P-201ENST00000473024 299 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.34□□□□□ -1.23
SSR1P43307 OR7E154P-201ENST00000525174 932 ntBASIC7.34□□□□□ -1.23
SSR1P43307 OR7E161P-201ENST00000533722 967 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 AC090971.3-201ENST00000557871 1041 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AL031846.1-201ENST00000560933 314 ntBASIC7.34□□□□□ -1.23
SSR1P43307 MIR4685-201ENST00000578185 69 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 AC111186.1-201ENST00000604684 130 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AL136097.3-201ENST00000611097 505 ntBASIC7.34□□□□□ -1.23
SSR1P43307 FRG2MP-201ENST00000613317 856 ntBASIC7.34□□□□□ -1.23
SSR1P43307 pRNA.9-201ENST00000618609 89 ntBASIC7.34□□□□□ -1.23
SSR1P43307 AC034229.6-201ENST00000623704 224 ntBASIC7.34□□□□□ -1.23
SSR1P43307 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SSR1P43307 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SSR1P43307 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.34□□□□□ -1.23
SSR1P43307 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.34□□□□□ -1.24
SSR1P43307 AP005139.1-201ENST00000580702 1647 ntBASIC7.34□□□□□ -1.24
SSR1P43307 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.24
SSR1P43307 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.34□□□□□ -1.24
SSR1P43307 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.33□□□□□ -1.24
SSR1P43307 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.33□□□□□ -1.24
SSR1P43307 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
SSR1P43307 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SSR1P43307 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.33□□□□□ -1.24
SSR1P43307 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
SSR1P43307 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SSR1P43307 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SSR1P43307 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.33□□□□□ -1.24
SSR1P43307 RPLP0P1-201ENST00000457002 361 ntBASIC7.33□□□□□ -1.24
SSR1P43307 RPL34P34-201ENST00000465389 354 ntBASIC7.33□□□□□ -1.24
SSR1P43307 RN7SL145P-201ENST00000469955 296 ntBASIC7.33□□□□□ -1.24
SSR1P43307 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.33□□□□□ -1.24
SSR1P43307 AP000805.1-201ENST00000471604 784 ntBASIC7.33□□□□□ -1.24
SSR1P43307 MYL6P4-201ENST00000477911 453 ntBASIC7.33□□□□□ -1.24
SSR1P43307 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 RN7SKP233-201ENST00000517005 110 ntBASIC7.33□□□□□ -1.24
SSR1P43307 EEF1B2P2-201ENST00000519625 676 ntBASIC7.33□□□□□ -1.24
SSR1P43307 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.33□□□□□ -1.24
SSR1P43307 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.33□□□□□ -1.24
SSR1P43307 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.33□□□□□ -1.24
SSR1P43307 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 ACTG1P15-201ENST00000570019 1063 ntBASIC7.33□□□□□ -1.24
SSR1P43307 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.33□□□□□ -1.24
SSR1P43307 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 AL031777.2-201ENST00000611953 196 ntBASIC7.33□□□□□ -1.24
SSR1P43307 AL138960.1-201ENST00000613838 513 ntBASIC7.33□□□□□ -1.24
SSR1P43307 U1.41-201ENST00000617626 165 ntBASIC7.33□□□□□ -1.24
SSR1P43307 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 FKBP1AP4-201ENST00000631775 336 ntBASIC7.33□□□□□ -1.24
SSR1P43307 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 AP002800.1-201ENST00000624982 2225 ntBASIC7.33□□□□□ -1.24
SSR1P43307 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.33□□□□□ -1.24
SSR1P43307 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 AC125232.1-201ENST00000452554 1408 ntBASIC7.33□□□□□ -1.24
SSR1P43307 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SSR1P43307 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.33□□□□□ -1.24
SSR1P43307 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SSR1P43307 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms