Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 RNU1-55P-201ENST00000365510 158 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC245036.1-201ENST00000391727 309 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL359694.1-201ENST00000403247 604 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 SNORA11.5-201ENST00000408163 128 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 RPL24P2-201ENST00000421023 475 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL139184.1-202ENST00000422303 222 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC010086.1-201ENST00000437359 1052 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC234771.2-201ENST00000445718 597 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 RPL26P30-201ENST00000453533 435 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 RN7SL382P-201ENST00000482631 282 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 RN7SL568P-201ENST00000493069 298 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL365223.1-201ENST00000574864 1297 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL354702.2-202ENST00000641481 890 ntBASIC8.01□□□□□ -1.13
HLA-DOAP06340 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-DOAP06340 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-DOAP06340 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-DOAP06340 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-DOAP06340 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8□□□□□ -1.13
HLA-DOAP06340 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 AC020978.6-201ENST00000571197 3177 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8□□□□□ -1.13
HLA-DOAP06340 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 AC090181.3-201ENST00000624777 1514 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8□□□□□ -1.13
HLA-DOAP06340 AC107977.1-201ENST00000355745 939 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 RPL12P23-201ENST00000405880 490 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL645939.3-201ENST00000435408 225 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 LINC00328-2P-201ENST00000436585 219 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC8□□□□□ -1.13
HLA-DOAP06340 UBBP5-201ENST00000446970 266 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 RWDD4P1-201ENST00000488019 565 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 PABPC1P1-201ENST00000506347 591 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8□□□□□ -1.13
HLA-DOAP06340 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL445383.1-201ENST00000554689 874 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 GTF2IP6-201ENST00000583143 541 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8□□□□□ -1.13
HLA-DOAP06340 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 HCFC2P1-201ENST00000392864 1592 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 UGT2B25P-201ENST00000511504 1586 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8□□□□□ -1.13
HLA-DOAP06340 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8□□□□□ -1.13
HLA-DOAP06340 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8□□□□□ -1.13
HLA-DOAP06340 AC020658.2-201ENST00000559030 4020 ntBASIC8□□□□□ -1.13
HLA-DOAP06340 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 SNORA70.3-201ENST00000365075 132 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms