Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC089984.3-201ENST00000552838 363 ntBASIC7.18□□□□□ -1.26
APOEP02649 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 FXNP1-201ENST00000555153 337 ntBASIC7.18□□□□□ -1.26
APOEP02649 AL109628.1-201ENST00000556877 366 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC010287.1-201ENST00000566916 357 ntBASIC7.18□□□□□ -1.26
APOEP02649 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
APOEP02649 AC087575.1-201ENST00000585087 229 ntBASIC7.18□□□□□ -1.26
APOEP02649 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.18□□□□□ -1.26
APOEP02649 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.18□□□□□ -1.26
APOEP02649 MRPL57P3-201ENST00000619218 176 ntBASIC7.18□□□□□ -1.26
APOEP02649 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.18□□□□□ -1.26
APOEP02649 DLEU2L-201ENST00000371086 3555 ntBASIC7.18□□□□□ -1.26
APOEP02649 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
APOEP02649 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
APOEP02649 DDX43P1-201ENST00000510713 1763 ntBASIC7.18□□□□□ -1.26
APOEP02649 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.17□□□□□ -1.26
APOEP02649 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 RN7SKP189-201ENST00000365042 330 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 PPIAP26-201ENST00000377951 522 ntBASIC7.17□□□□□ -1.26
APOEP02649 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 AL672212.1-201ENST00000422246 400 ntBASIC7.17□□□□□ -1.26
APOEP02649 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 GOT2P2-201ENST00000450663 1251 ntBASIC7.17□□□□□ -1.26
APOEP02649 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 MTCYBP44-201ENST00000514835 823 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.17□□□□□ -1.26
APOEP02649 OR4A21P-201ENST00000532759 944 ntBASIC7.17□□□□□ -1.26
APOEP02649 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.17□□□□□ -1.26
APOEP02649 MIR378C-201ENST00000578683 81 ntBASIC7.17□□□□□ -1.26
APOEP02649 MIR4312-201ENST00000579909 76 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC100832.2-201ENST00000582080 776 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 MIR6070-201ENST00000613967 103 ntBASIC7.17□□□□□ -1.26
APOEP02649 MIR6774-201ENST00000614651 70 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC017037.4-201ENST00000624526 826 ntBASIC7.17□□□□□ -1.26
APOEP02649 AC073857.1-201ENST00000625082 1054 ntBASIC7.17□□□□□ -1.26
APOEP02649 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 TRIM53CP-201ENST00000531490 1354 ntBASIC7.17□□□□□ -1.26
APOEP02649 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
APOEP02649 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.17□□□□□ -1.26
APOEP02649 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
APOEP02649 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.16□□□□□ -1.26
APOEP02649 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 AC093829.1-201ENST00000506662 1618 ntBASIC7.16□□□□□ -1.26
APOEP02649 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
APOEP02649 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
APOEP02649 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.16□□□□□ -1.26
APOEP02649 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
APOEP02649 MTND6P1-201ENST00000417434 424 ntBASIC7.16□□□□□ -1.26
APOEP02649 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.16□□□□□ -1.26
APOEP02649 PSMC1P2-201ENST00000423961 1204 ntBASIC7.16□□□□□ -1.26
APOEP02649 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.16□□□□□ -1.26
APOEP02649 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.16□□□□□ -1.26
APOEP02649 RPL3P11-201ENST00000434028 1146 ntBASIC7.16□□□□□ -1.26
APOEP02649 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC7.16□□□□□ -1.26
APOEP02649 AL845321.1-201ENST00000444603 348 ntBASIC7.16□□□□□ -1.26
APOEP02649 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.16□□□□□ -1.26
APOEP02649 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.16□□□□□ -1.26
APOEP02649 NMNAT1P3-201ENST00000457517 888 ntBASIC7.16□□□□□ -1.26
APOEP02649 RN7SL259P-201ENST00000478499 253 ntBASIC7.16□□□□□ -1.26
APOEP02649 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.16□□□□□ -1.26
APOEP02649 RNA5SP318-201ENST00000516352 92 ntBASIC7.16□□□□□ -1.26
APOEP02649 RNA5SP278-201ENST00000517055 102 ntBASIC7.16□□□□□ -1.26
APOEP02649 AP005902.2-201ENST00000518393 307 ntBASIC7.16□□□□□ -1.26
APOEP02649 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.16□□□□□ -1.26
APOEP02649 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms