Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 FABP12P1-201ENST00000401911 322 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.25□□□□□ -1.41
SPTA1P02549 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 RN7SL254P-201ENST00000460609 284 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 RN7SL797P-201ENST00000486314 297 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RN7SL284P-201ENST00000498823 275 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RN7SKP196-201ENST00000516267 345 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC091133.5-201ENST00000603088 301 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AL136097.3-201ENST00000611097 505 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC6.25□□□□□ -1.41
SPTA1P02549 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC090983.1-201ENST00000623426 3897 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC084782.1-201ENST00000564401 2465 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 OSTCP4-201ENST00000424397 449 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 CEACAMP5-201ENST00000448037 961 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC026336.1-201ENST00000466577 351 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RN7SL654P-201ENST00000479178 292 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.25□□□□□ -1.41
SPTA1P02549 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC002519.2-203ENST00000567043 837 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC020978.7-201ENST00000575953 1187 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 MIR4502-201ENST00000580432 81 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.25□□□□□ -1.41
SPTA1P02549 AC016405.2-201ENST00000607393 312 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SPTA1P02549 OR2AH1P-202ENST00000641232 2744 ntBASIC6.25□□□□□ -1.41
SPTA1P02549 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SPTA1P02549 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 RN7SKP278-201ENST00000410504 342 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 MAPK6PS6-201ENST00000420752 1053 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 AC092865.3-201ENST00000425390 1026 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 FTH1P5-201ENST00000425761 545 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 RPL5P34-201ENST00000426545 891 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 NANOGP4-201ENST00000427230 913 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 FABP7P2-201ENST00000429946 379 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 SNRPBP1-201ENST00000443634 282 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.24□□□□□ -1.41
SPTA1P02549 RNA5SP278-201ENST00000517055 102 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 MRPS17P1-201ENST00000596009 3130 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SPTA1P02549 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 PPIAP19-201ENST00000486414 492 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 AC092718.4-201ENST00000566639 716 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.24□□□□□ -1.41
SPTA1P02549 AC018445.2-201ENST00000622987 260 ntBASIC6.24□□□□□ -1.41
SPTA1P02549 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SPTA1P02549 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
SPTA1P02549 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms