Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL390840.1-201ENST00000420303 988 ntBASIC6.29□□□□□ -1.4
SSX4O60224 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 EEF1GP7-201ENST00000422983 703 ntBASIC6.29□□□□□ -1.4
SSX4O60224 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 YY1P1-201ENST00000427625 668 ntBASIC6.29□□□□□ -1.4
SSX4O60224 SUMO2P8-201ENST00000434672 286 ntBASIC6.29□□□□□ -1.4
SSX4O60224 OSTCP2-201ENST00000437956 444 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 SCDP1-201ENST00000455244 1081 ntBASIC6.29□□□□□ -1.4
SSX4O60224 RBMY2EP-202ENST00000456360 940 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AL133480.2-201ENST00000456723 487 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 AC008799.2-201ENST00000484429 647 ntBASIC6.29□□□□□ -1.4
SSX4O60224 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX4O60224 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX4O60224 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 AC120036.3-201ENST00000517826 292 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 ST13P6-201ENST00000522430 1102 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX4O60224 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX4O60224 NDUFA3P2-201ENST00000531434 232 ntBASIC6.29□□□□□ -1.4
SSX4O60224 PDCL3P1-201ENST00000534575 734 ntBASIC6.29□□□□□ -1.4
SSX4O60224 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.29□□□□□ -1.4
SSX4O60224 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 MIR378H-201ENST00000579966 83 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AC067852.5-201ENST00000589299 310 ntBASIC6.29□□□□□ -1.4
SSX4O60224 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 U47924.1-201ENST00000606539 434 ntBASIC6.29□□□□□ -1.4
SSX4O60224 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.29□□□□□ -1.4
SSX4O60224 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSX4O60224 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.29□□□□□ -1.4
SSX4O60224 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 ZNF402P-201ENST00000404435 3100 ntBASIC6.29□□□□□ -1.4
SSX4O60224 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 TTC41P-205ENST00000551270 3963 ntBASIC6.29□□□□□ -1.4
SSX4O60224 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 RNA5SP238-201ENST00000365464 120 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC090114.1-201ENST00000393266 448 ntBASIC6.28□□□□□ -1.4
SSX4O60224 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 NUS1P4-201ENST00000401550 585 ntBASIC6.28□□□□□ -1.4
SSX4O60224 RN7SKP225-201ENST00000410405 352 ntBASIC6.28□□□□□ -1.4
SSX4O60224 RFESDP1-201ENST00000422350 461 ntBASIC6.28□□□□□ -1.4
SSX4O60224 E2F6P1-201ENST00000428850 745 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AL356133.1-201ENST00000444762 372 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 AC022730.1-201ENST00000473114 568 ntBASIC6.28□□□□□ -1.4
SSX4O60224 RN7SL259P-201ENST00000478499 253 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AP000926.3-201ENST00000497201 299 ntBASIC6.28□□□□□ -1.4
SSX4O60224 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 HMGN1P26-201ENST00000558737 303 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.28□□□□□ -1.4
SSX4O60224 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.28□□□□□ -1.4
SSX4O60224 AL121782.1-201ENST00000611242 413 ntBASIC6.28□□□□□ -1.4
SSX4O60224 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC073862.4-201ENST00000622982 854 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC069542.2-201ENST00000624816 216 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AC073488.8-201ENST00000631952 757 ntBASIC6.28□□□□□ -1.4
SSX4O60224 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SSX4O60224 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms