Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 BZW1P1-201ENST00000454901 1240 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 RPL10P7-201ENST00000495649 625 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC023818.1-201ENST00000498379 384 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AL135933.1-201ENST00000498657 802 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 SNORA58-201ENST00000505219 137 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC069240.2-201ENST00000550242 609 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 PPIAP14-201ENST00000577627 496 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC011921.2-201ENST00000589465 152 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC006328.2-201ENST00000623198 397 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC012005.2-201ENST00000624333 397 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 MKI67P1-201ENST00000604297 1460 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 ZNF812P-201ENST00000457674 1694 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC007012.2-201ENST00000623206 1676 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC023886.2-201ENST00000321285 411 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 NPM1P14-201ENST00000343743 866 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CYCSP17-201ENST00000407870 315 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 RN7SKP268-201ENST00000411107 316 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC024937.2-201ENST00000411669 1242 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ETF1P1-206ENST00000427296 984 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 SNX18P23-201ENST00000510867 677 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC017007.1-201ENST00000511960 415 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC106785.4-201ENST00000569492 412 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 WDR45BP1-201ENST00000583470 1029 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 MTCO1P25-201ENST00000414449 1799 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 ZNF806-201ENST00000438300 1774 ntBASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RSPO3Q9BXY4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC020658.2-201ENST00000559030 4020 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms