Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC132825.5-201ENST00000640603 310 ntBASIC9.25□□□□□ -0.93
LRCH3Q96II8 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
LRCH3Q96II8 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LRCH3Q96II8 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC9.25□□□□□ -0.93
LRCH3Q96II8 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC9.25□□□□□ -0.93
LRCH3Q96II8 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 AC073065.1-201ENST00000411678 2866 ntBASIC9.25□□□□□ -0.93
LRCH3Q96II8 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LRCH3Q96II8 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC093225.1-201ENST00000506867 1408 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC079341.1-201ENST00000567769 2266 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC127024.8-201ENST00000623719 2094 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 Z93929.1-201ENST00000418200 1475 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 Y_RNA.144-201ENST00000363521 113 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 Y_RNA.372-201ENST00000365599 102 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 RNU6-932P-201ENST00000391108 106 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AL138807.1-201ENST00000400354 459 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 FCF1P10-201ENST00000407590 479 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 SNORA73.3-201ENST00000410213 189 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 FYTTD1P1-201ENST00000424250 921 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 RPE-205ENST00000429907 925 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC069154.1-201ENST00000432914 542 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 RPL7P36-201ENST00000444633 681 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC011979.1-201ENST00000472300 483 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 RN7SL146P-201ENST00000472338 297 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 RPL7AP30-201ENST00000482859 796 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC127024.1-201ENST00000490847 418 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC104971.1-201ENST00000495117 578 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC092349.1-201ENST00000504903 310 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 IGLVI-56-201ENST00000521342 342 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC087477.6-201ENST00000559595 843 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC006960.3-201ENST00000561845 705 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AL035071.1-201ENST00000569087 2131 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 RPS3AP23-202ENST00000574601 686 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC060780.3-201ENST00000589464 80 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC007262.1-201ENST00000604099 321 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC245028.3-201ENST00000618197 285 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC025279.3-201ENST00000622398 104 ntBASIC9.24□□□□□ -0.93
LRCH3Q96II8 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LRCH3Q96II8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LRCH3Q96II8 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 AC106872.5-201ENST00000508856 1416 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC9.23□□□□□ -0.93
LRCH3Q96II8 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 TEX21P-201ENST00000447107 1476 ntBASIC9.23□□□□□ -0.93
LRCH3Q96II8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LRCH3Q96II8 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms