Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 BRD7P1-201ENST00000557705 1915 ntBASIC8.78□□□□□ -1
HLA-CQ95604 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.78□□□□□ -1
HLA-CQ95604 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 LINC00488-201ENST00000494582 2520 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.78□□□□□ -1
HLA-CQ95604 AC008124.1-201ENST00000609803 9730 ntBASIC8.78□□□□□ -1
HLA-CQ95604 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-CQ95604 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-CQ95604 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 RNU6-31P-201ENST00000384388 108 ntBASIC8.78□□□□□ -1
HLA-CQ95604 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 AC233728.2-201ENST00000425348 757 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 TBL1YP1-201ENST00000440297 1026 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 FTH1P7-201ENST00000450676 552 ntBASIC8.78□□□□□ -1
HLA-CQ95604 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.78□□□□□ -1
HLA-CQ95604 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 RN7SL12P-201ENST00000473849 290 ntBASIC8.78□□□□□ -1
HLA-CQ95604 UBTFL6-201ENST00000477929 1024 ntBASIC8.78□□□□□ -1
HLA-CQ95604 CEACAMP3-202ENST00000483806 638 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 RN7SL776P-201ENST00000493390 268 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AL358832.1-201ENST00000497800 389 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 ATP1B1P1-201ENST00000509767 915 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 AC096661.1-201ENST00000515870 822 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AP000662.1-201ENST00000530952 487 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.78□□□□□ -1
HLA-CQ95604 OR4K7P-201ENST00000580232 945 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 OR1X1P-201ENST00000606159 931 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AL136985.2-201ENST00000607372 535 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.78□□□□□ -1
HLA-CQ95604 AC131902.3-201ENST00000611767 581 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AL353726.1-201ENST00000614041 1000 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC009159.1-201ENST00000618386 642 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC012414.7-202ENST00000622705 1090 ntBASIC8.78□□□□□ -1
HLA-CQ95604 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.78□□□□□ -1
HLA-CQ95604 AC024614.3-201ENST00000637860 256 ntBASIC8.78□□□□□ -1
HLA-CQ95604 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-CQ95604 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 AC133552.3-201ENST00000572236 1869 ntBASIC8.78□□□□□ -1
HLA-CQ95604 FMO9P-202ENST00000488458 1535 ntBASIC8.78□□□□□ -1
HLA-CQ95604 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.78□□□□□ -1
HLA-CQ95604 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-CQ95604 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.78□□□□□ -1
HLA-CQ95604 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.78□□□□□ -1
HLA-CQ95604 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
HLA-CQ95604 XRCC6P1-201ENST00000420392 1805 ntBASIC8.77□□□□□ -1
HLA-CQ95604 GTF2H1-214ENST00000534641 2587 ntTSL 2 BASIC8.77□□□□□ -1
HLA-CQ95604 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1
HLA-CQ95604 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HLA-CQ95604 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
HLA-CQ95604 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC00994-201ENST00000485805 2129 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
HLA-CQ95604 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 GSN-AS1-201ENST00000414544 4763 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC087762.2-201ENST00000639346 3773 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
HLA-CQ95604 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 RN7SKP239-201ENST00000364814 295 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC093719.1-202ENST00000392735 373 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms