Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC124891.1-201ENST00000536322 519 ntBASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 TDGP1-201ENST00000543961 1229 ntBASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 WBP1LP11-201ENST00000586141 328 ntBASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 WBP1LP12-201ENST00000604449 331 ntBASIC10.36□□□□□ -0.75
VPS8Q8N3P4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 5S_rRNA.29-201ENST00000641250 107 ntBASIC10.36□□□□□ -0.75
VPS8Q8N3P4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 OR2M1P-201ENST00000318104 951 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 RANP6-201ENST00000413691 644 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC096632.2-201ENST00000438139 1239 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 RPL3P13-201ENST00000550415 216 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AL162632.2-201ENST00000553933 399 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AL049840.5-201ENST00000602827 552 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 U1.41-201ENST00000617626 165 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AC005393.1-201ENST00000617916 584 ntBASIC10.35□□□□□ -0.75
VPS8Q8N3P4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS8Q8N3P4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 Z68868.1-201ENST00000429048 544 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 RN7SL39P-201ENST00000462264 297 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 RN7SKP183-201ENST00000517169 324 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC026898.1-201ENST00000586404 571 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC130448.2-201ENST00000624082 374 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SNX18P10-201ENST00000625014 519 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC110373.1-201ENST00000505994 3505 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 MALAT1-202ENST00000534336 8708 ntBASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS8Q8N3P4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS8Q8N3P4 VTRNA3-1P-201ENST00000362552 102 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 RN7SKP171-201ENST00000364417 303 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 MIR640-201ENST00000385086 96 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 AC121334.1-201ENST00000396414 802 ntBASIC10.33□□□□□ -0.76
VPS8Q8N3P4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms