Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 UG0898H09-202ENST00000623646 7040 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC122713.2-201ENST00000624942 3335 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 RN7SKP47-201ENST00000365347 328 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 RN7SKP62-201ENST00000384539 329 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC000089.1-201ENST00000424559 801 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC083855.1-201ENST00000440041 258 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AL445991.1-201ENST00000450381 475 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC022080.2-201ENST00000452932 533 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 RN7SKP198-201ENST00000459286 306 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 RN7SL83P-201ENST00000468131 297 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC026254.2-201ENST00000475295 371 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC096743.1-201ENST00000485172 319 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 RN7SL143P-201ENST00000496780 297 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 NXPE2P1-201ENST00000543705 726 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 AL512329.1-201ENST00000404600 1592 ntBASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.38□□□□□ -1.39
H3F3CQ6NXT2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AL121578.2-201ENST00000448797 447 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC131233.1-201ENST00000479200 955 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 RN7SL502P-201ENST00000481857 290 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC021146.11-201ENST00000503319 491 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC139713.1-202ENST00000512366 460 ntBASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.37□□□□□ -1.39
H3F3CQ6NXT2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 516.4 ms