Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPS4XP23-201ENST00000487801 237 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC091133.5-201ENST00000603088 301 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 OR4C1P-202ENST00000641065 1569 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 SNORD35A-201ENST00000363389 86 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 CYCSP17-201ENST00000407870 315 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 TIMM8BP2-201ENST00000445940 251 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 RPS14P8-201ENST00000478778 369 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 OR52H2P-201ENST00000514607 902 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 RPL41P2-201ENST00000544920 409 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC011891.2-201ENST00000604949 397 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 CASC19-232ENST00000641480 1244 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AL121936.2-201ENST00000641935 662 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 PSMC1P4-201ENST00000515236 1327 ntBASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
SHROOM1Q2M3G4 AL096816.1-201ENST00000623300 2920 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 CASC19-205ENST00000641013 1411 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 RNA5SP512-201ENST00000364550 120 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 MTND6P1-201ENST00000417434 424 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 GAPDHP33-201ENST00000443168 1013 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 RPL7AP23-201ENST00000482625 776 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 RN7SL413P-201ENST00000482700 297 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 RN7SL170P-201ENST00000487098 295 ntBASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.9□□□□□ -1.14
SHROOM1Q2M3G4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms