Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 THAP12P1-201ENST00000398672 2203 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CUBNP1-201ENST00000412710 1790 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SKP118-201ENST00000364331 330 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SKP48-201ENST00000365031 328 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SNORA10-201ENST00000384084 133 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 VN1R12P-201ENST00000403778 876 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AF274573.1-201ENST00000430535 494 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RPL14P5-201ENST00000436474 730 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC245047.5-201ENST00000437312 556 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AP000936.2-201ENST00000447151 681 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RARRES2P3-201ENST00000457739 473 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SL251P-201ENST00000464175 297 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SYPL1P1-201ENST00000473622 768 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SL335P-201ENST00000482790 304 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SKP248-201ENST00000516278 305 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RN7SKP70-201ENST00000516655 271 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 OR4V1P-201ENST00000525394 1140 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CENPUP1-201ENST00000526649 1202 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AP001000.1-201ENST00000526843 742 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC092851.1-201ENST00000535964 478 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC008127.2-201ENST00000549925 1075 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 BLZF2P-201ENST00000553776 1130 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 MIR3137-201ENST00000577367 75 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC007448.1-201ENST00000582714 234 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 MIR3663-201ENST00000583207 97 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC113143.2-201ENST00000603849 394 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL136139.1-201ENST00000605568 222 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC091946.2-201ENST00000606105 291 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL121782.1-201ENST00000611242 413 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC015819.1-201ENST00000613588 663 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL606490.2-201ENST00000457562 1330 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 FTX-215ENST00000638681 9771 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RSPO4Q2I0M5 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RSPO4Q2I0M5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms