Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 SNX18P3-202ENST00000565670 1750 ntBASIC4.68□□□□□ -1.66
RPL39P62891 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 EPS15P1-202ENST00000459691 2071 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC005225.5-201ENST00000623547 2225 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RPL39P62891 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RPL39P62891 RN7SKP237-201ENST00000364663 301 ntBASIC4.68□□□□□ -1.66
RPL39P62891 SNORA70.5-201ENST00000365519 135 ntBASIC4.68□□□□□ -1.66
RPL39P62891 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 FAUP2-201ENST00000394301 401 ntBASIC4.68□□□□□ -1.66
RPL39P62891 HNRNPCP2-201ENST00000399515 881 ntBASIC4.68□□□□□ -1.66
RPL39P62891 HIST1H2BPS2-201ENST00000402707 340 ntBASIC4.68□□□□□ -1.66
RPL39P62891 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 SLC25A5P7-201ENST00000406156 896 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AL049697.3-201ENST00000406493 982 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC116036.1-201ENST00000412199 367 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AL663061.1-201ENST00000416625 580 ntBASIC4.68□□□□□ -1.66
RPL39P62891 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RPL39P62891 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 GAPDHP55-201ENST00000423136 803 ntBASIC4.68□□□□□ -1.66
RPL39P62891 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 FTLP17-201ENST00000432567 525 ntBASIC4.68□□□□□ -1.66
RPL39P62891 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 MGAT2P1-201ENST00000449718 797 ntBASIC4.68□□□□□ -1.66
RPL39P62891 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 BX323845.2-201ENST00000458382 234 ntBASIC4.68□□□□□ -1.66
RPL39P62891 RPSAP24-201ENST00000461543 873 ntBASIC4.68□□□□□ -1.66
RPL39P62891 RPL23AP68-201ENST00000480924 445 ntBASIC4.68□□□□□ -1.66
RPL39P62891 RN7SL519P-201ENST00000497925 288 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 AC117383.2-201ENST00000514722 322 ntBASIC4.68□□□□□ -1.66
RPL39P62891 ADI1P2-201ENST00000514945 429 ntBASIC4.68□□□□□ -1.66
RPL39P62891 RN7SKP248-201ENST00000516278 305 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 OR5M6P-201ENST00000530227 937 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 MRPS21P9-201ENST00000571150 257 ntBASIC4.68□□□□□ -1.66
RPL39P62891 EIF4A3P1-201ENST00000578499 647 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC4.68□□□□□ -1.66
RPL39P62891 AC011921.2-201ENST00000589465 152 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 AP000436.1-201ENST00000605239 800 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC4.68□□□□□ -1.66
RPL39P62891 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.68□□□□□ -1.66
RPL39P62891 AC138904.2-201ENST00000614412 107 ntBASIC4.68□□□□□ -1.66
RPL39P62891 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC4.68□□□□□ -1.66
RPL39P62891 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 PWRN1-212ENST00000569908 1435 ntBASIC4.68□□□□□ -1.66
RPL39P62891 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 AL512329.1-201ENST00000404600 1592 ntBASIC4.68□□□□□ -1.66
RPL39P62891 USP46-202ENST00000451218 4622 ntTSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
RPL39P62891 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.68□□□□□ -1.66
RPL39P62891 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 MAPK10-261ENST00000641050 3109 ntBASIC4.68□□□□□ -1.66
RPL39P62891 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPL39P62891 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 AC090774.4-201ENST00000578888 1372 ntBASIC4.67□□□□□ -1.66
RPL39P62891 TTC41P-205ENST00000551270 3963 ntBASIC4.67□□□□□ -1.66
RPL39P62891 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms