Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC022726.2-201ENST00000634673 547 ntBASIC8.13□□□□□ -1.11
CNGA1P29973 AC119674.1-201ENST00000641611 1210 ntBASIC8.13□□□□□ -1.11
CNGA1P29973 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CNGA1P29973 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.13□□□□□ -1.11
CNGA1P29973 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.13□□□□□ -1.11
CNGA1P29973 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.13□□□□□ -1.11
CNGA1P29973 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 AP004289.1-201ENST00000436307 2205 ntBASIC8.13□□□□□ -1.11
CNGA1P29973 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.13□□□□□ -1.11
CNGA1P29973 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CNGA1P29973 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CNGA1P29973 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CNGA1P29973 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
CNGA1P29973 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 RNU6-670P-201ENST00000364312 104 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 MIR7-1-201ENST00000384871 110 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 RNU2-72P-201ENST00000411175 163 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 NPM1P36-201ENST00000415681 835 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.12□□□□□ -1.11
CNGA1P29973 RPL7AP51-201ENST00000422016 760 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AL596268.1-201ENST00000427910 1048 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 RN7SL325P-201ENST00000460434 283 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AC040975.1-201ENST00000472104 316 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 RPL29P23-201ENST00000486188 442 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.12□□□□□ -1.11
CNGA1P29973 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 RNA5SP473-201ENST00000516402 125 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC8.12□□□□□ -1.11
CNGA1P29973 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC090079.2-201ENST00000575289 768 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC8.12□□□□□ -1.11
CNGA1P29973 WBP1LP11-201ENST00000586141 328 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.12□□□□□ -1.11
CNGA1P29973 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 WBP1LP8-201ENST00000617401 327 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AC009032.1-201ENST00000617574 431 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 AP002371.2-201ENST00000624450 503 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC8.12□□□□□ -1.11
CNGA1P29973 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.12□□□□□ -1.11
CNGA1P29973 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CNGA1P29973 AC092646.2-201ENST00000431242 2095 ntBASIC8.12□□□□□ -1.11
CNGA1P29973 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CNGA1P29973 AC011008.2-201ENST00000624866 3352 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.11□□□□□ -1.11
CNGA1P29973 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 AC008171.1-201ENST00000395058 200 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 AL353133.1-201ENST00000407695 401 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 RN7SKP85-201ENST00000411349 318 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 RPL5P6-201ENST00000425640 886 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.11□□□□□ -1.11
CNGA1P29973 AL445991.1-201ENST00000450381 475 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 RN7SL492P-201ENST00000460700 295 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC096922.1-201ENST00000461635 651 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 RN7SL393P-201ENST00000463588 296 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms