Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.34□□□□□ -1.23
RB1P06400 MIR6721-201ENST00000617181 87 ntBASIC7.34□□□□□ -1.23
RB1P06400 AC006328.2-201ENST00000623198 397 ntBASIC7.34□□□□□ -1.23
RB1P06400 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RB1P06400 AC012005.2-201ENST00000624333 397 ntBASIC7.34□□□□□ -1.23
RB1P06400 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RB1P06400 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.34□□□□□ -1.23
RB1P06400 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RB1P06400 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.34□□□□□ -1.23
RB1P06400 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
RB1P06400 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RB1P06400 AL096816.1-201ENST00000623300 2920 ntBASIC7.34□□□□□ -1.24
RB1P06400 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RB1P06400 HCFC2P1-201ENST00000392864 1592 ntBASIC7.33□□□□□ -1.24
RB1P06400 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.33□□□□□ -1.24
RB1P06400 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RB1P06400 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RB1P06400 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RB1P06400 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 RNA5SP172-201ENST00000365061 118 ntBASIC7.33□□□□□ -1.24
RB1P06400 AC006511.2-201ENST00000388966 660 ntBASIC7.33□□□□□ -1.24
RB1P06400 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RB1P06400 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RB1P06400 RBBP4P5-201ENST00000398583 1266 ntBASIC7.33□□□□□ -1.24
RB1P06400 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 AL360013.1-201ENST00000419031 858 ntBASIC7.33□□□□□ -1.24
RB1P06400 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.33□□□□□ -1.24
RB1P06400 RPL5P6-201ENST00000425640 886 ntBASIC7.33□□□□□ -1.24
RB1P06400 PSMD10P2-201ENST00000432890 672 ntBASIC7.33□□□□□ -1.24
RB1P06400 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 POU5F1P5-201ENST00000445059 658 ntBASIC7.33□□□□□ -1.24
RB1P06400 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.33□□□□□ -1.24
RB1P06400 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 AC021146.11-201ENST00000503319 491 ntBASIC7.33□□□□□ -1.24
RB1P06400 AC112484.3-201ENST00000505910 329 ntBASIC7.33□□□□□ -1.24
RB1P06400 HMGN1P16-201ENST00000508308 283 ntBASIC7.33□□□□□ -1.24
RB1P06400 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 RN7SL199P-201ENST00000578752 281 ntBASIC7.33□□□□□ -1.24
RB1P06400 RN7SL656P-201ENST00000579044 281 ntBASIC7.33□□□□□ -1.24
RB1P06400 RN7SL270P-201ENST00000579643 281 ntBASIC7.33□□□□□ -1.24
RB1P06400 RN7SL753P-201ENST00000581238 290 ntBASIC7.33□□□□□ -1.24
RB1P06400 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.33□□□□□ -1.24
RB1P06400 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.33□□□□□ -1.24
RB1P06400 AC004943.1-203ENST00000624370 1074 ntBASIC7.33□□□□□ -1.24
RB1P06400 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.33□□□□□ -1.24
RB1P06400 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 AC090771.1-201ENST00000585803 1618 ntBASIC7.33□□□□□ -1.24
RB1P06400 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RB1P06400 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.33□□□□□ -1.24
RB1P06400 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 ZNF806-201ENST00000438300 1774 ntBASIC7.33□□□□□ -1.24
RB1P06400 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RB1P06400 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RB1P06400 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RB1P06400 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RB1P06400 AL023806.3-201ENST00000638502 2704 ntBASIC7.32□□□□□ -1.24
RB1P06400 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RB1P06400 TPTE2P2-201ENST00000403471 1466 ntBASIC7.32□□□□□ -1.24
RB1P06400 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 OR7A2P-201ENST00000304105 930 ntBASIC7.32□□□□□ -1.24
RB1P06400 OR7E156P-201ENST00000400303 464 ntBASIC7.32□□□□□ -1.24
RB1P06400 MRPS21P5-201ENST00000417885 231 ntBASIC7.32□□□□□ -1.24
RB1P06400 GAPDHP57-201ENST00000424400 585 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC099782.1-201ENST00000425889 474 ntBASIC7.32□□□□□ -1.24
RB1P06400 RBMY2AP-201ENST00000445405 1157 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms