Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AP003499.1-201ENST00000527217 574 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ITFG2-AS1-203ENST00000547794 442 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC034105.5-201ENST00000564017 314 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ACTG1P15-201ENST00000570019 1063 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL021368.3-201ENST00000607119 578 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC010542.5-201ENST00000612427 382 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP002383.6-201ENST00000616726 697 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 CU638689.3-201ENST00000624266 1031 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL132640.3-201ENST00000630473 177 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 KNOP1P2-201ENST00000605379 1317 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RBPJP5-201ENST00000449433 1447 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC083843.3-201ENST00000623679 2186 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SLC2A3P4-201ENST00000521259 1471 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RAET1M-201ENST00000405282 596 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 BZW2-203ENST00000407633 898 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 MIR1296-201ENST00000408136 92 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 MIR1269A-201ENST00000408636 105 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SNRPCP9-201ENST00000417250 207 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 BPI-202ENST00000417318 1082 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 RPL12P29-201ENST00000425565 457 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 Z68868.1-201ENST00000429048 544 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC013467.1-201ENST00000430717 1041 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 TSSK1A-201ENST00000450724 768 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 POLR2CP1-201ENST00000453699 765 ntBASIC3.31□□□□□ -1.88
LINC01558Q9Y6Z2 AL158090.1-201ENST00000453921 602 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms