Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 QRSL1P3-201ENST00000552666 1316 ntBASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RSPO3Q9BXY4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AL591848.4-201ENST00000567832 3472 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 RNA5SP176-201ENST00000390956 110 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AL662791.3-201ENST00000413771 776 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 PPIAP23-201ENST00000420099 497 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 SNRPEP5-201ENST00000425442 278 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC009303.1-201ENST00000426307 352 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC239367.3-201ENST00000428996 814 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC087499.3-202ENST00000441215 1173 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC133965.1-201ENST00000452984 354 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 RPL36AP55-201ENST00000454114 305 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 RN7SL456P-201ENST00000469290 295 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC010409.2-201ENST00000505780 478 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 PDCL3P1-201ENST00000534575 734 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 SLC25A51P2-201ENST00000535708 889 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AL590032.1-201ENST00000604920 252 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AL078624.2-201ENST00000605063 554 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AL121782.1-201ENST00000611242 413 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 MIR6883-201ENST00000614952 78 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC017037.4-201ENST00000624526 826 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 AC093909.6-201ENST00000624757 775 ntBASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.2□□□□□ -1.42
RSPO3Q9BXY4 OR2AH1P-202ENST00000641232 2744 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC127024.8-201ENST00000623719 2094 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC122713.2-201ENST00000624942 3335 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 OR2A3P-202ENST00000641249 1776 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 MIR99A-201ENST00000384906 81 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AL590635.1-201ENST00000406314 586 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 ZNF37CP-201ENST00000406795 241 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AC096537.2-201ENST00000413707 714 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 AL161742.1-201ENST00000418154 584 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 MYL6P3-201ENST00000436904 432 ntBASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RSPO3Q9BXY4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms