Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AL354707.3-201ENST00000427308 331 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 OR2L9P-201ENST00000444456 913 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 OR7E99P-201ENST00000505750 922 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC112225.1-201ENST00000508230 297 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AL136097.3-201ENST00000611097 505 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 AC073488.6-201ENST00000632293 754 ntBASIC8.15□□□□□ -1.1
SNED1Q8TER0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SNED1Q8TER0 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SNED1Q8TER0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
SNED1Q8TER0 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.15□□□□□ -1.11
SNED1Q8TER0 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.15□□□□□ -1.11
SNED1Q8TER0 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.15□□□□□ -1.11
SNED1Q8TER0 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.15□□□□□ -1.11
SNED1Q8TER0 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SNED1Q8TER0 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC022613.3-201ENST00000560740 1346 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC011447.6-201ENST00000623510 2598 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AL512422.1-201ENST00000407033 553 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 CHEK2P5-201ENST00000423877 246 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 OSTCP4-201ENST00000424397 449 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 AMYP1-201ENST00000440059 1023 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC021220.1-201ENST00000507445 630 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 RN7SKP35-201ENST00000517210 151 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC036111.2-201ENST00000533247 901 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC023827.2-201ENST00000566880 1061 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 LINC00556-201ENST00000569603 412 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC034111.1-201ENST00000562143 3770 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 AC007938.1-201ENST00000562524 2902 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 CASC19-246ENST00000641625 1606 ntBASIC8.14□□□□□ -1.11
SNED1Q8TER0 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SNED1Q8TER0 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNED1Q8TER0 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 OR4C1P-202ENST00000641065 1569 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 FLJ42393-201ENST00000623801 2270 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 SNORA38B-201ENST00000363524 131 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 RPL5P20-201ENST00000403848 896 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 AC104843.2-201ENST00000427666 297 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AL391987.1-201ENST00000441025 200 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 OR52I1-201ENST00000450052 1050 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 SETP20-201ENST00000457046 852 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 LSM3P4-201ENST00000502948 309 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms