Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NBPF8-201ENST00000583271 5330 ntBASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
TRIM48Q8IWZ4 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC009501.3-201ENST00000605001 1352 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL355375.1-201ENST00000405686 392 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL390840.1-201ENST00000420303 988 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 ETF1P1-206ENST00000427296 984 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 RPL5P27-201ENST00000437011 881 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 FUNDC2P2-202ENST00000443452 493 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL451063.1-201ENST00000450164 1133 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 NDUFB4P1-201ENST00000462398 381 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 RN7SL251P-201ENST00000464175 297 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 RNA5SP75-201ENST00000516841 111 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 OR6M3P-201ENST00000531567 700 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC138749.2-201ENST00000566048 167 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC090666.1-201ENST00000578241 445 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC011193.2-201ENST00000582638 367 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC008751.2-201ENST00000597885 980 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL353807.4-201ENST00000604995 257 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 FAM72A-208ENST00000607379 1139 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC097381.3-201ENST00000608962 462 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL445649.1-201ENST00000615941 691 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC004801.6-201ENST00000616571 978 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC025162.2-201ENST00000619602 560 ntBASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM48Q8IWZ4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 HDAC1P1-201ENST00000455482 1445 ntBASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.25
TRIM48Q8IWZ4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 TAS2R15P-201ENST00000390674 928 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AC121334.1-201ENST00000396414 802 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AP002530.1-201ENST00000405705 684 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 SNORA3.1-201ENST00000408166 111 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 RAC1P4-201ENST00000419413 579 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL392003.1-201ENST00000434394 243 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL513321.1-201ENST00000441175 761 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 FTH1P7-201ENST00000450676 552 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 RPS14P7-201ENST00000473701 448 ntBASIC7.21□□□□□ -1.26
TRIM48Q8IWZ4 NPM1P17-201ENST00000479221 602 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms