Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AL590762.1-201ENST00000391782 432 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AL034399.1-201ENST00000451535 380 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 PSMA6P2-201ENST00000457574 686 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC074386.1-206ENST00000487102 761 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 RPL5P33-201ENST00000487833 905 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC096754.1-201ENST00000508904 818 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 SUMO2P7-201ENST00000511179 285 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC023827.2-201ENST00000566880 1061 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MRPS21P9-201ENST00000571150 257 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 RPL7AP69-201ENST00000595306 806 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC020765.1-201ENST00000604296 328 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 AC016590.3-201ENST00000611171 753 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MIR6813-201ENST00000621638 56 ntBASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 AC012213.2-201ENST00000562917 4597 ntBASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 AC092701.1-201ENST00000623627 1551 ntBASIC6.4□□□□□ -1.39
H3F3CQ6NXT2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 LPAL2-203ENST00000454031 2498 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 PPIAP26-201ENST00000377951 522 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 MIR1266-201ENST00000408125 84 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC006509.1-201ENST00000420788 634 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 Z82198.3-201ENST00000421145 199 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 FAM183DP-201ENST00000421987 399 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC021074.2-201ENST00000468434 172 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC009567.2-201ENST00000502989 349 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC084851.2-201ENST00000530377 364 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 MIR6885-201ENST00000612241 66 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC048341.3-201ENST00000619323 491 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC211486.4-201ENST00000621495 113 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 AP002800.1-201ENST00000624982 2225 ntBASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.39□□□□□ -1.39
H3F3CQ6NXT2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms