Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 RNU1-19P-201ENST00000363306 165 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 AL354794.2-201ENST00000424795 1248 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AL590762.4-201ENST00000425885 253 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 VN1R110P-201ENST00000438988 971 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AC096922.1-201ENST00000461635 651 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC139795.3-201ENST00000606358 541 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AP000577.1-201ENST00000624366 878 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AL139384.2-201ENST00000613809 3590 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 LINC02019-201ENST00000608605 2060 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC024587.1-201ENST00000505925 2157 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
BRCA2P51587 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 RPA2P1-201ENST00000556557 721 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 AC092121.1-201ENST00000569452 202 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.06□□□□□ -1.28
BRCA2P51587 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC7.06□□□□□ -1.28
BRCA2P51587 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.06□□□□□ -1.28
BRCA2P51587 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
BRCA2P51587 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
BRCA2P51587 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
BRCA2P51587 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.05□□□□□ -1.28
BRCA2P51587 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.05□□□□□ -1.28
BRCA2P51587 AP005597.2-201ENST00000526238 341 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.05□□□□□ -1.28
BRCA2P51587 AL139407.1-201ENST00000613826 1175 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 uc_338.18-201ENST00000615451 175 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC245014.3-201ENST00000618589 347 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 RN7SKP62-201ENST00000384539 329 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.05□□□□□ -1.28
BRCA2P51587 RN7SL643P-201ENST00000471845 291 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC022415.1-202ENST00000486612 523 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 AP005119.1-201ENST00000580956 292 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AL356986.1-201ENST00000604085 341 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 Mico1.1-201ENST00000611698 204 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC037198.3-201ENST00000616754 526 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 AC092724.1-201ENST00000624623 3397 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 RPL35AP3-201ENST00000414680 288 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.05□□□□□ -1.28
BRCA2P51587 CRYGGP-201ENST00000443337 145 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 AC135721.2-201ENST00000464237 300 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 RNA5SP228-201ENST00000516232 133 ntBASIC7.05□□□□□ -1.28
BRCA2P51587 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.05□□□□□ -1.28
BRCA2P51587 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
BRCA2P51587 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.05□□□□□ -1.28
BRCA2P51587 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms