Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC034229.6-201ENST00000623704 224 ntBASIC11.72□□□□□ -0.53
SMARCA4P51532 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMARCA4P51532 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMARCA4P51532 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMARCA4P51532 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC11.72□□□□□ -0.53
SMARCA4P51532 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMARCA4P51532 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC11.71□□□□□ -0.53
SMARCA4P51532 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMARCA4P51532 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SMARCA4P51532 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SMARCA4P51532 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC11.71□□□□□ -0.53
SMARCA4P51532 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC11.71□□□□□ -0.53
SMARCA4P51532 RN7SL643P-201ENST00000471845 291 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 UBFD1P1-201ENST00000473259 814 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SMARCA4P51532 AC139272.1-201ENST00000505516 640 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 AC131392.1-201ENST00000506490 633 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 Y_RNA.667-201ENST00000516212 107 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC11.71□□□□□ -0.53
SMARCA4P51532 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC11.71□□□□□ -0.53
SMARCA4P51532 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC11.71□□□□□ -0.53
SMARCA4P51532 AL049840.5-201ENST00000602827 552 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 AL513548.2-201ENST00000602994 1207 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 AL354718.1-201ENST00000619764 589 ntBASIC11.71□□□□□ -0.53
SMARCA4P51532 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMARCA4P51532 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC11.71□□□□□ -0.53
SMARCA4P51532 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SMARCA4P51532 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC11.71□□□□□ -0.53
SMARCA4P51532 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SMARCA4P51532 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
SMARCA4P51532 AL353763.2-201ENST00000623489 1903 ntBASIC11.71□□□□□ -0.54
SMARCA4P51532 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC11.71□□□□□ -0.54
SMARCA4P51532 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 RNU1-150P-201ENST00000362491 162 ntBASIC11.71□□□□□ -0.54
SMARCA4P51532 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC11.71□□□□□ -0.54
SMARCA4P51532 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC11.71□□□□□ -0.54
SMARCA4P51532 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC11.71□□□□□ -0.54
SMARCA4P51532 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC11.71□□□□□ -0.54
SMARCA4P51532 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC11.71□□□□□ -0.54
SMARCA4P51532 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC11.71□□□□□ -0.54
SMARCA4P51532 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
SMARCA4P51532 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
SMARCA4P51532 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC11.71□□□□□ -0.54
SMARCA4P51532 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMARCA4P51532 AC008627.1-201ENST00000517511 1704 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 PRELID1P2-201ENST00000407805 396 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC11.7□□□□□ -0.54
SMARCA4P51532 AL133351.3-201ENST00000454998 193 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 RPL12P31-201ENST00000478433 450 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 KHDC1P1-201ENST00000511053 508 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC11.7□□□□□ -0.54
SMARCA4P51532 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC11.7□□□□□ -0.54
SMARCA4P51532 AC131009.3-201ENST00000621809 287 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC11.7□□□□□ -0.54
SMARCA4P51532 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMARCA4P51532 AL355974.1-201ENST00000618896 1708 ntBASIC11.7□□□□□ -0.54
SMARCA4P51532 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC11.7□□□□□ -0.54
SMARCA4P51532 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMARCA4P51532 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMARCA4P51532 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 AL353743.3-201ENST00000442109 1468 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 TMSB4XP4-201ENST00000323496 618 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 RN7SKP121-201ENST00000410842 305 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 SOCS5P1-201ENST00000440415 949 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC11.69□□□□□ -0.54
SMARCA4P51532 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC11.69□□□□□ -0.54
SMARCA4P51532 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC11.69□□□□□ -0.54
SMARCA4P51532 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC11.69□□□□□ -0.54
SMARCA4P51532 OR7E18P-201ENST00000592589 702 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 MIR6085-201ENST00000618314 110 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC11.69□□□□□ -0.54
SMARCA4P51532 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC11.69□□□□□ -0.54
SMARCA4P51532 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 AL359396.1-201ENST00000623151 2376 ntBASIC11.69□□□□□ -0.54
SMARCA4P51532 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms