Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC084337.1-201ENST00000524809 686 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC110056.1-201ENST00000525759 911 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC5.77□□□□□ -1.49
CDX1P47902 OR6M3P-201ENST00000531567 700 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.77□□□□□ -1.49
CDX1P47902 MTATP6P25-201ENST00000574491 261 ntBASIC5.77□□□□□ -1.49
CDX1P47902 AC024614.1-201ENST00000577546 307 ntBASIC5.77□□□□□ -1.49
CDX1P47902 PPIAP14-201ENST00000577627 496 ntBASIC5.77□□□□□ -1.49
CDX1P47902 RBM4-213ENST00000578778 582 ntTSL 4 BASIC5.77□□□□□ -1.49
CDX1P47902 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.77□□□□□ -1.49
CDX1P47902 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.77□□□□□ -1.49
CDX1P47902 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.77□□□□□ -1.49
CDX1P47902 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 AC233280.20-201ENST00000637412 416 ntBASIC5.77□□□□□ -1.49
CDX1P47902 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDX1P47902 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.77□□□□□ -1.49
CDX1P47902 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDX1P47902 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.76□□□□□ -1.49
CDX1P47902 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 PWRN1-212ENST00000569908 1435 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC005261.2-201ENST00000593427 4258 ntBASIC5.76□□□□□ -1.49
CDX1P47902 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDX1P47902 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 MIR575-201ENST00000385013 94 ntBASIC5.76□□□□□ -1.49
CDX1P47902 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDX1P47902 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.76□□□□□ -1.49
CDX1P47902 RN7SKP117-201ENST00000410175 264 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AL355862.1-201ENST00000412705 353 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AL353626.3-201ENST00000413399 657 ntBASIC5.76□□□□□ -1.49
CDX1P47902 MTND4LP21-201ENST00000415303 295 ntBASIC5.76□□□□□ -1.49
CDX1P47902 TAS2R2P-201ENST00000421146 910 ntBASIC5.76□□□□□ -1.49
CDX1P47902 FDPSP6-201ENST00000425091 512 ntBASIC5.76□□□□□ -1.49
CDX1P47902 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.76□□□□□ -1.49
CDX1P47902 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 RPL34P27-201ENST00000428810 349 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AF274573.1-201ENST00000430535 494 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AL645936.2-201ENST00000430565 928 ntBASIC5.76□□□□□ -1.49
CDX1P47902 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.76□□□□□ -1.49
CDX1P47902 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 RN7SL688P-201ENST00000471754 275 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC015820.1-201ENST00000473882 321 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC010409.2-201ENST00000505780 478 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC147055.1-201ENST00000509261 750 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.76□□□□□ -1.49
CDX1P47902 GCSHP1-201ENST00000512554 484 ntBASIC5.76□□□□□ -1.49
CDX1P47902 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 AC021146.10-201ENST00000515628 706 ntBASIC5.76□□□□□ -1.49
CDX1P47902 RNA5SP75-201ENST00000516841 111 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC5.76□□□□□ -1.49
CDX1P47902 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.76□□□□□ -1.49
CDX1P47902 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.76□□□□□ -1.49
CDX1P47902 EIF1AXP2-201ENST00000555940 413 ntBASIC5.76□□□□□ -1.49
CDX1P47902 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDX1P47902 IGHV1OR15-3-201ENST00000564926 351 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC010547.7-201ENST00000570323 333 ntBASIC5.76□□□□□ -1.49
CDX1P47902 RPS7P1-201ENST00000571702 585 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC090241.1-201ENST00000587732 621 ntBASIC5.76□□□□□ -1.49
CDX1P47902 AC006116.6-201ENST00000593258 1103 ntBASIC5.76□□□□□ -1.49
CDX1P47902 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC5.76□□□□□ -1.49
CDX1P47902 VN1R81P-201ENST00000602085 372 ntBASIC5.76□□□□□ -1.49
CDX1P47902 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDX1P47902 AC126773.4-201ENST00000612545 3043 ntBASIC5.76□□□□□ -1.49
CDX1P47902 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC5.76□□□□□ -1.49
CDX1P47902 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms