Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 UBA52P7-201ENST00000486088 380 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 OR7E91P-202ENST00000642062 1198 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 CR788268.1-201ENST00000603931 1809 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 PCDHA10-203ENST00000562220 12358 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AL627308.1-201ENST00000435693 821 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AL353662.1-201ENST00000439099 327 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AL136038.1-201ENST00000497246 351 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 KHDC1P1-201ENST00000511053 508 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 RPL12P48-201ENST00000605620 304 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AP000997.2-201ENST00000564619 8400 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 RPL7AP14-201ENST00000424041 802 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 BX119321.1-201ENST00000428912 797 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 MRPS5P4-201ENST00000592830 325 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.79□□□□□ -1.32
CHD7Q9P2D1 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD7Q9P2D1 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC244452.1-201ENST00000413798 141 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC093155.2-201ENST00000420734 937 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 YWHAEP1-201ENST00000453697 763 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC106785.4-201ENST00000569492 412 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AP001823.1-201ENST00000604056 1003 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AL356986.1-201ENST00000604085 341 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC211433.2-201ENST00000608433 387 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC108673.3-201ENST00000609183 335 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 Z93929.1-201ENST00000418200 1475 ntBASIC6.78□□□□□ -1.32
CHD7Q9P2D1 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
CHD7Q9P2D1 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms