Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 RN7SKP196-201ENST00000516267 345 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 OR4A13P-201ENST00000529316 942 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC091304.4-201ENST00000565703 620 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC245052.7-201ENST00000601161 359 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 SNORD96A-201ENST00000606577 79 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC007485.2-201ENST00000623493 1667 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AP003385.1-201ENST00000426387 893 ntBASIC9.73□□□□□ -0.85
SIN3AQ96ST3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AC013731.1-201ENST00000604340 883 ntBASIC9.73□□□□□ -0.85
SIN3AQ96ST3 MIR6885-201ENST00000612241 66 ntBASIC9.73□□□□□ -0.85
SIN3AQ96ST3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 AC005514.1-201ENST00000623521 208 ntBASIC9.73□□□□□ -0.85
SIN3AQ96ST3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
SIN3AQ96ST3 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 RNU1-5P-201ENST00000362684 144 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 RNA5SP140-201ENST00000364524 92 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 MIR640-201ENST00000385086 96 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 PSMD8P1-201ENST00000436275 769 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 GAPDHP20-201ENST00000444107 1007 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC074386.1-206ENST00000487102 761 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 CREM-242ENST00000490511 469 ntTSL 2 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC026956.1-201ENST00000558741 396 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AC027796.1-201ENST00000575593 512 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 AL008582.1-201ENST00000609612 442 ntBASIC9.72□□□□□ -0.85
SIN3AQ96ST3 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SIN3AQ96ST3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.71□□□□□ -0.85
SIN3AQ96ST3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.71□□□□□ -0.85
SIN3AQ96ST3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SIN3AQ96ST3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SIN3AQ96ST3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.71□□□□□ -0.86
SIN3AQ96ST3 PMS2P9-201ENST00000441237 515 ntBASIC9.71□□□□□ -0.86
SIN3AQ96ST3 GAPDHP16-201ENST00000448152 962 ntBASIC9.71□□□□□ -0.86
SIN3AQ96ST3 AC022080.2-201ENST00000452932 533 ntBASIC9.71□□□□□ -0.86
SIN3AQ96ST3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms