Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 OR7E94P-202ENST00000601375 790 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC007255.2-201ENST00000604053 631 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC025287.2-201ENST00000621911 668 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 OR2A3P-202ENST00000641249 1776 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AL731556.1-201ENST00000394628 3711 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MFSD8-256ENST00000641949 1640 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MKI67P1-201ENST00000604297 1460 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 RNA5SP188-201ENST00000362916 129 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 OR5P4P-201ENST00000424698 917 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL161626.1-201ENST00000441480 490 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 HSPA8P3-201ENST00000449300 780 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL139156.3-201ENST00000454802 394 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 PABPC1P10-201ENST00000464731 381 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC079944.1-201ENST00000485426 495 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 IGLV3-6-201ENST00000523937 250 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL031846.1-201ENST00000560933 314 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC119674.1-209ENST00000642031 997 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AL356361.1-201ENST00000400943 1459 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 AC007012.2-201ENST00000623206 1676 ntBASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC71LQ8N9Z2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 AL162456.1-201ENST00000634535 2006 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 AC007485.2-201ENST00000623493 1667 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 OLMALINC-203ENST00000641087 3779 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 AC120036.2-201ENST00000509729 1474 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 STAG3L4-201ENST00000352103 530 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 RNU1-21P-201ENST00000363327 163 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 RNA5SP514-201ENST00000363717 111 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 TRGV5P-201ENST00000419915 354 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 BMP6P1-201ENST00000431230 679 ntBASIC5.67□□□□□ -1.5
CCDC71LQ8N9Z2 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 487.6 ms